LOCUS BX537952 7707 bp mRNA linear HUM 16-OCT-2008
DEFINITION Homo sapiens mRNA; cDNA DKFZp686J1286 (from clone DKFZp686J1286).
ACCESSION BX537952
VERSION BX537952.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 7707)
AUTHORS Poustka A., Albert R., Moosmayer P., Schupp I., Wellenreuther R.,
Mewes H.W., Weil B., Amid C., Osanger A., Fobo G., Han M.,
Wiemann S.
JOURNAL Submitted (17-JUN-2003) to the INSDC. MIPS, Ingolstaedter
Landstr.1, D-85764 Neuherberg, GERMANY
COMMENT Clone from S. Wiemann, Molecular Genome Analysis, German Cancer
Research Center (DKFZ); Email s.wiemann@dkfz-heidelberg.de;
sequenced by DKFZ (German Cancer Research Center,
Heidelberg/Germany) within the cDNA sequencing consortium of
the German Genome Project.
This clone (DKFZp686J1286) is available at the RZPD in Berlin.
Please contact the RZPD: Ressourcenzentrum, Heubnerweg 6,
14059 Berlin-Charlottenburg, GERMANY; Email: clone@rzpd.de
Further information about the clone and the sequencing project
is available at http://mips.gsf.de/proj/cDNA/
FEATURES Location/Qualifiers
source 1..7707
/db_xref="H-InvDB:HIT000054736"
/organism="Homo sapiens"
/map="5q22.2"
/mol_type="mRNA"
/dev_stage="adult"
/clone_lib="686 (synonym: hlcc3). Vector pSport1_Sfi; host
DH10B; sites SfiIA + SfiIB"
/clone="DKFZp686J1286"
/tissue_type="human retina"
/db_xref="taxon:9606"
CDS <1..2491
/codon_start=2
/gene="DKFZp686J1286"
/product="hypothetical protein"
/note="colorectal mutant cancer protein, differentially
spliced"
/db_xref="H-InvDB:HIT000054736.15"
/db_xref="InterPro:IPR019536"
/db_xref="InterPro:IPR040171"
/db_xref="UniProtKB/TrEMBL:Q7Z3E9"
/protein_id="CAD97919.1"
/translation="DCGALTPGRELACWCSMGLLHSAALASLKGDIVELNKRLQQTER
ERDLLEKKLAKAQCEQSHLMREHEDVQERTTLRYEERITELHSVIAELNKKIDRLQGT
TIREEDEYSELRSELSQSQHEVNEDSRSMDQDQTSVSIPENQSTMVTADMDNCSDLNS
ELQRVLTGLENVVCGRKKSSCSLSVAEVDRHIEQLTTASEHCDLAIKTVEEIEGVLGR
DLYPNLAEERSRWEKELAGLREENESLTAMLCSKEEELNRTKATMNAIREERDRLRRR
VRELQTRLQSVQATGPSSPGRLTSTNRPINPSTGELSTSSSSNDIPIAKIAERVKLSK
TRSESSSSDRPVLGSEISSIGVSSSVAEHLAHSLQDCSNIQEIFQTLYSHGSAISESK
IREFEVETERLNSRIEHLKSQNDLLTITLEECKSNAERMSMLVGKYESNATALRLALQ
YSEQCIEAYELLLALAESEQSLILGQFRAAGVGSSPGDQSGDENITQMLKRAHDCRKT
AENAAKALLMRLDGSCGGAFAVAGCSVQPWESLSSNSHTSTTSSTASSCDTEFTKEDE
QRLKDYIQQLKNDRAAVKLTMLELESIHIDPLSYDVKPRGDSQRLDLENAVLMQELMA
MKEEMAELKAQLYLLEKEKKALELKLSTREAQEQAYLVHIEHLKSEVEEQKEQRMRSL
SSTSSGSKDKPGKECADAASPALSLAELRTTCSENELAAEFTNAIRREKKLKARVQEL
VSALERLTKSSEIRHQQSAEFVNDLKRANSNLVAAYEKAKKKHQNKLKKLESQMMAMV
ERHETQVRMLKQRIALLEEENSRPHTNETSL"
regulatory 7670..7675
/regulatory_class="polyA_signal_sequence"
polyA_site 7688
BASE COUNT 2174 a 1726 c 1748 g 2059 t
ORIGIN
1 ggattgcggg gccctgacgc cagggaggga acttgcctgc tggtgttcca tgggtttgct
61 ccattcagca gccctggcat cactaaaggg agatatagtg gaacttaata aacgtctcca
121 gcaaacagag agggaacggg accttctgga aaagaaattg gccaaggcac agtgcgagca
181 gtcccacctc atgagagagc atgaggatgt ccaggagcga acgacgcttc gctatgagga
241 acgcatcaca gagctccaca gcgtcattgc ggagctcaac aagaagatag accgtctgca
301 aggcaccacc atcagggagg aagatgagta ctcagaactg cgatcagaac tcagccagag
361 ccaacacgag gtcaacgagg actctcgaag catggaccaa gaccagacct ctgtctctat
421 ccccgaaaac cagtctacca tggttactgc tgacatggac aactgcagtg acctgaactc
481 agaactgcag agggtgctga cagggctgga gaatgttgtc tgcggcagga agaagagcag
541 ctgcagcctc tccgtggccg aggtggacag gcacattgag cagctcacca cagccagcga
601 gcactgtgac ctggctatta agacagtcga ggagattgag ggggtgcttg gccgggacct
661 gtatcccaac ctggctgaag agaggtctcg gtgggagaag gagctggctg ggctgaggga
721 agagaatgag agcctgactg ccatgctgtg cagcaaagag gaagaactga accggactaa
781 ggccaccatg aatgccatcc gggaagagcg ggaccggctc cggaggaggg tcagagagct
841 tcaaactcga ctacagagcg tgcaggccac aggtccctcc agccctggcc gcctcacttc
901 caccaaccgc ccgattaacc ccagcactgg ggagctgagc acaagcagca gcagcaatga
961 cattcccatc gccaagattg ctgagagggt gaagctatca aagacaaggt ccgaatcgtc
1021 atcatctgat cggccagtcc tgggctcaga aatcagtagc ataggggtat ccagcagtgt
1081 ggctgaacac ctggcccact cacttcagga ctgctccaat atccaagaga ttttccaaac
1141 actctactca cacggatctg ccatctcaga aagcaagatt agagagtttg aggtggaaac
1201 agaacggctg aatagccgga ttgagcacct caaatcccaa aatgacctcc tgaccataac
1261 cttggaggaa tgtaaaagca atgccgagag gatgagcatg ctggtgggaa aatacgaatc
1321 caatgccaca gcgctgaggc tggccttgca gtacagcgag cagtgcatcg aagcctacga
1381 actcctcctg gcgctggcag agagtgagca gagcctcatc ctggggcagt tccgagcggc
1441 gggcgtgggg tcctcccctg gagaccagtc gggggatgaa aacatcactc agatgctcaa
1501 gcgagctcat gactgccgga agacagctga gaatgctgcc aaggccttgc tcatgaggct
1561 ggacggcagc tgtgggggag cctttgccgt ggccggctgc agcgtgcagc cctgggagag
1621 cctttcctcc aacagccaca ccagcacaac cagctccaca gccagtagtt gcgacaccga
1681 gttcactaaa gaagacgagc agaggctgaa ggattatatc cagcagctca agaatgacag
1741 ggctgcggtc aagctgacca tgctggagct ggaaagcatc cacatcgatc ctctcagcta
1801 tgacgtcaag cctcggggag acagccagag gctggatctg gaaaacgcag tgcttatgca
1861 ggagctcatg gccatgaagg aggagatggc cgagttgaag gcccagctct acctactgga
1921 gaaagagaag aaggccctgg agctgaagct gagcacgcgg gaggcccagg agcaggccta
1981 cctggtgcac attgagcacc tgaagtccga ggtggaggag cagaaggagc agcggatgcg
2041 atccctcagc tccaccagca gcggcagcaa agataaacct ggcaaggagt gtgctgatgc
2101 tgcctcccca gctctgtccc tagctgaact caggacaacg tgcagcgaga atgagctggc
2161 tgcggagttc accaacgcca ttcgtcgaga aaagaagttg aaggccagag ttcaagagct
2221 ggtgagtgcc ttggagagac tcaccaagag cagtgaaatc cgacatcagc aatctgcaga
2281 gttcgtgaat gatctaaagc gggccaacag caacctggtg gctgcctatg agaaagcaaa
2341 gaaaaagcat caaaacaaac tgaagaagtt agagtcgcag atgatggcca tggtggagag
2401 acatgagacc caagtgagga tgctcaagca aagaatagct ctgctagagg aggagaactc
2461 caggccacac accaatgaaa cttcgcttta atcagcactc acgcaccgga gttctgccca
2521 tgggaagtaa actgcagcag gccactgggg acagaagggc ccatgtactt gttgggagga
2581 ggaggaaagg gaaggctggc aggtaggtcg gcacttggac aatggagtgc cccaactcaa
2641 cccttggggt gactggccat ggtgacattg tggactgtat ccagaggtgc ccgctcttcc
2701 ctcctgggcc cacaacagcg tgtaaacaca tgttctgtgc ctgctcagca gagcctcgtt
2761 tctgctttca gcactcactc tccccctcct cttctggtct ggcggctgtg catcagtggg
2821 atcccagaca tttgtttctg taagattttc cattgtatcc tctttttggt agatgctggg
2881 ctcatcttct agaatctcgt ttctcctctt tcctcctgct tcatgggaaa acagacctgt
2941 gtgtgcctcc agcatttaaa aggactgctg atttgtttac tacagcaagg ctttggtttc
3001 caagtcccgg gtctcaactt taagatagag gcggccataa gaggtgatct ctgggagtta
3061 taggtcatgg gaagagcgta gacaggtgtt acttacagtc ccagatacac taaagttaca
3121 aacagaccac caccaggact gtgcctgaac aattttgtat tgagagaata aaaacttcct
3181 tcaatcttca ttttggaggc agggctggga agggagcgct ctcttgattc tgggatttct
3241 ccctctcagt ggagccttat taatatccaa gacttagagc tgggaatctt tttgatacct
3301 gtagtggaac taaaattctg tcaggggttt cttcaagagc tgagaaacat tattagcact
3361 tcccgcccca gggcactaca taattgctgt tctgctgaat caaatctctt ccacatgggt
3421 gcatttgtag ctctggacct gtctctacct aaggacaaga cactgaggag atactgaaca
3481 ttttgcaaaa cttatcacgc ctacttaaga gtgctgtgta acccccagtt caagacttag
3541 ctcctgttgt catgacgggg acagagtgag ggaatggtag ttaaggcttc ttttttgccc
3601 ccagatacat ggtgatggtt agcatatggt gcttaaaagg ttaaatttca agcaaaatgc
3661 ttacagggct aggcagtacc aaagtaactg aattatttca ggaaggtctt caatcttaaa
3721 acaaattcat tattcttttt cagttttacc tcttctctct cagttctaca ctgatacact
3781 tgaaggacca tttactgttt ttttctgtag caccagagaa tccatccaaa gttccctatg
3841 aaaaatgtgt tccattgcca tagctgacta caaattaaag ttgaggaggt ttctgcatag
3901 agtctttatg tccataagct acgggtaggt ctattttcag agcatgatac aaattccaca
3961 gccttctgtt cgctggagga tactccagcc accagttcgg agggcagaca gctgtatcct
4021 aaaagcaacc actgagaggc cagcagtgag gctgcccatc tccaaaacga aacaacagat
4081 caactggtat cagtctagaa ggaccagctt tggggtgctt tgatcactat gaaaatgttc
4141 actggtttct gtcaatcact tggtcaaagt tagttcctgt gatttttttt tttttttttt
4201 tgagatggag ttttgctctt gtcaccaggc tgaagtgcag tggcgtgatc ttggctcact
4261 gcaacctctg cctcctgagt agctggaatt acaggtgccc gccaccatac ccagctagtt
4321 tttttgtatt tttagtagag acagggtttc accatgttgg ccaggctggt ctcgaactcc
4381 tgaccactga tccacccacc tcggcctccc aaagtgctgg gattacaggc atgagccaat
4441 gtgcctggcc attcctgtga ttttttagaa tttttcactt ttcatataaa gttgcatttt
4501 atcatgagga aaatgttttg gctgaaaaac atatgcccca aaaaaaaaaa aaatctgttt
4561 tcactatttt tccagcttgc ctagggaaac gtcctcccct gagcaaagtg ggatgtgcat
4621 ggctcttttt tgtgattaag caggcatcaa atgggcagtt ttcattttca ctgacacaga
4681 aacatgtggc tgaagcagga ataaaatcct gcctactgac ttctgtctcc attcttgctc
4741 caggtaaaat cagagaacct ccccttcttg gccctttaat tcccccaggc agaggcggct
4801 ccagctcctg ttaagggccc cagttttact catgctacct gaccttagtt ttagtacttt
4861 caaatgtgat ttgggtaaaa actattttgc aggcaaaagt gttaattttt tataaatatg
4921 tataataaaa aagctataaa agtttttcct tttcttgtat ttttcaaata ctccccaaga
4981 cacaatcctt gaaggtgaac taggtggcac ttgattatgc taattgtggg agctactgaa
5041 ctatactgat taaattaaat gcttgcaggt tcctgggtaa ttttcctttg tgaataacct
5101 ggcgctacct gaatttttct ctaacaaaca tctccaatga gggtaaacaa tgatcttgat
5161 tctaatttat atgaggttaa aaaccttcag atttcgtatt ttgaattgtt ctccctagtt
5221 tcctcagtgg ttaccccctt ttagtcagta accatctctg ttcagaattc agtctttggc
5281 ttttgaagaa atgggcacag agccaaagga cccatttcac agttcccttg gaatatattt
5341 cccattgttg gactgaggca aacaaaacca actgtgcaaa tcacaagcaa aagagacttc
5401 tgtccgtagt tgcgagtgcc atcagtgtga gcttaccagc tacaaaaatc tgtcatggac
5461 tggggaacag tatgattcct tattgaaact ttcatcctca tcggctggct tgtcagcgtt
5521 ctgaagttaa tatccatgct gcctgaaaca aatgttatgt ttaactagca cttaactttt
5581 aaaattgctt aattctcctt tcagatgcat gcactaagtc ttctctgagc ctgcagcaat
5641 attttagagg gacctcttct aagtcagagc cttgacattc tactccaaaa ggaagtccaa
5701 attagagccc ataggctttt tcttaaaagc tgttaaggag tagtaagaaa gttaccactc
5761 taaggaaaac atgaaactat ctgaaagtct tctggttcct aactggatac agattagatt
5821 attttaaatg agaaaaaagt gcaccgtagt tacccgatca agattggact gcctgtgtcc
5881 ctggcatgaa ttaaagaacc tccatagttg cttgttccct tctgaaggtg tttcctatgg
5941 cccacgagaa ttataaagca atcacttttt aagtctatca gtcaacctta atagctctca
6001 agagtttcga ttatcaagct ttaaagtgat aacatatcaa gatgactatt aaaaaataaa
6061 catctctgaa agtgtccttt cctccataag gctttaaaca atttgcaaat tcttaattgg
6121 gagtatgtcc caatcattct attaaactat ttacagctct acctacttct agattcagca
6181 aacagagcta ctagttagag tattttgaga gccaaaatag taagagactt ctgtaatggt
6241 tgagatttct gcactgacct taattagggt accgccatag ggctaccaaa gtttttagtg
6301 agggctgggg aggtggagca taagtaacat tttttttctg cagaaggtga tggctttgta
6361 gaacactata aaatttttca ggaaaacata cagcaaattt tcttatccag tgggaacagc
6421 ctatttgaca aggaatgata tacaagtttg attcaccttt gagcactctt agagagttta
6481 cagaagaggc gtaactggtt acaaaacaaa agttacgcct tcactatcca gttcttaaag
6541 tttatccaca tcctacaaat cttatgttca tgtaggtcag gttaaagtaa gctccaaact
6601 tgtggccttc agaagcatct cctgtttaac acacctgaaa ttactctaac ttaatacatt
6661 tgtattctct aagaaataat gctgactgct gtcaccacag catcactgat ctctcagtgg
6721 ctgttaaaat ataaacaagt ggaaaaaaag tatacaagtt gatagcagct gttcatgtat
6781 tcttgttttg ctaatacctg tgtagagaaa gacagtttca catgcagatc accatacatt
6841 tttgcttaaa ggttacactg ggtaaactgt ttgtttatca cattacatct gggtgagatt
6901 ttgcatgtga ccaagaggaa gaaatcattc agtcccggaa atagcaactg ctatgtaaaa
6961 ccacatcctt gactagtact tcatctttcc acagtcattc atctgctaat caggtgaaat
7021 atcagctcag cagaacaaag caagttatac acaaatttcc cccacattca cactgatgcc
7081 gtacttagta attctggttc taccattccc ttttgcactt tttgcaagtc aaattcatgt
7141 ggaaaaatgt tctgtttgta gaactcatag tattcactta tagtgctcat gtcaggaatg
7201 gcaagtgagt aagagcccct gataatctgc ttttgttaga acgtaatgca aagataataa
7261 aacatgtcca cttcttttct agttctaatc agtttttaga catcaagatt tatttacttt
7321 gcatgagatt tgtttcctat tatttgaata tgtgctatac gcttgaatta gaaaaacctg
7381 cttgaatgta ttgtcagtta ttaaagcaca tgtgactaag tttgcatttg tcagtattgt
7441 tctactgttt gtactgaaag tctcatttta aaattgctac ttaacactgt actatacctt
7501 gtaatttttt agattctcca cttgtattct ttaaatgttt ccagatgcct ttagttttag
7561 ctgctgtaaa atagctactt tgcgttattt gatatagaat tgttttttaa aaactccatt
7621 tatttataca gagacattta taatatttta caaacattct tatattctga ataaatattt
7681 ctaattccaa aaaaaaaaaa aaaaaaa
//