LOCUS BG086524 714 bp mRNA linear EST 12-MAY-2010 DEFINITION H3127C09-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3127C09 5', mRNA sequence. ACCESSION BG086524 VERSION BG086524.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 714) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG086524.1. Other_ESTs: H3127C09-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3127 row: C column: 09 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..714 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3127C09-5" /db_xref="taxon:10090" /clone="H3127C09" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 174 a 158 c 191 g 191 t ORIGIN 1 ggagcgaggg aagatggcgg ccgtggagct cgagtggatc ccggagacgc tctacaacac 61 cgccatctcc gctgtcgtgg acaactacat ccgctcgcgc cgcgacatcc gctccttgcc 121 ggagaatatc cagttcgacg tttactacaa gctttaccaa cagggacgct tgtgtcagct 181 cggcagtgaa ttctgtgaat tggaagtttt tgctaaagtt ttgagagctt tggataaaag 241 acatttgctc caccactgtt ttcaggctct gatggaccat ggcgttaagg tagcttccgt 301 cttggcctac tccttcagta gacggtgctc ttacatagca gagtccgacg ctgcagtaaa 361 ggagaaggcc atccaggttg gctttgtctt aggtggcttt ctttctgatg caggctggta 421 cagtgatgct gaaaaggttt ttctgtcctg ccttcagttg tgtacgctac atgatgagat 481 gctccactgg ttccgagcag tggagtgttg tgtgaggttg cttcatgtgc gaaatggaaa 541 ttgtaaatat catctaggtg aagaaacatt taaattagct cagacataca tggataagct 601 gtctaaacat ggccagcaag caaatagagc tgctctctac ggagaactat gtgcactcct 661 gtttgcaaaa agccactatg atgaggcata caagtggtgc gttgaggcaa tgaa //