LOCUS BG085851 520 bp mRNA linear EST 12-MAY-2010 DEFINITION H3118G11-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3118G11 5', mRNA sequence. ACCESSION BG085851 VERSION BG085851.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 520) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG085851.1. Other_ESTs: H3118G11-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3118 row: G column: 11 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..520 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3118G11-5" /db_xref="taxon:10090" /clone="H3118G11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 148 a 100 c 113 g 159 t ORIGIN 1 tttcatttca aggattcgtc gcatccagtg gattttctgg atgcattcag aacgttttac 61 atggatggac tatttactga tattaccctt cagtgtcctt caggcataat cttccattgt 121 caccgagctg ttttagctgc ctgcagcaat tattttaagg caatgttcac agctgacatg 181 aaagaaaaat ttaaaagtaa aataaaactg tcgggcatcc accatgatat tttggaaggc 241 cttgtaaatt atgcatatac ttctcaaatt gaaattacta agagaagtgt acagagcctt 301 cttgaagcag cggatctgct gcagtttctt tctgtaaaga aggcgtgtga gcagtttctg 361 gtcaggcacc tggacattga taactgtatc gggatgcact cttttgcaga attccatgtg 421 tgctcagaac tagagaagga atcccgcagg atcctctgct ccaggtttaa ggaagtttgg 481 cagcaagaag aatttctgga aatcagcctt gaaaagtttc //