LOCUS BG083226 676 bp mRNA linear EST 12-MAY-2010 DEFINITION H3085H08-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3085H08 5', mRNA sequence. ACCESSION BG083226 VERSION BG083226.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 676) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG083226.1. Other_ESTs: H3085H08-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3085 row: H column: 08 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..676 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3085H08-5" /db_xref="taxon:10090" /clone="H3085H08" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 235 a 107 c 176 g 158 t ORIGIN 1 gaaaagagta cccaaatgga tgtttctgta gatgtggcaa cagaggaaga taataaaaaa 61 gatgaatgtg aagcagtcac aactgaagtg aatgttgaag gagtagccac tgaggacttt 121 aattcaggta tggatctttc tgatactccc atacctgtaa gcaaggatgt tgagactgag 181 cacgcagcta gtggggaaat agagggggag agcaatgaat ctgattcagg ctcatgtgag 241 gaaatgaaca aagaaatggg aagtcacaaa gcccagatga gcactgaaat tgacagtgcc 301 agggtaaagg agacggacat acttgccagt gcctctaaat ctgaagaagc gctgattgga 361 agactagacg tcaacaccca gagctttgtt agtgacattg aaatgagttc tggagaaaga 421 actgttaatt gcaaaactga gacatccatt gaacttaata aattagatga agcaaaatta 481 agtggcaatg aagctacagt gggaaatgat actctgcagg aagtttgctt tacttcagag 541 aaagtggaga aattaccaca gtgtctgcta gttcaagtgg cttctgaact tggagcagaa 601 agcaatacta cgtctcccga aaagttagag ctggattctt ttggatcagt aaatgaaagt 661 cctagtggta tgcagc //