LOCUS BG077998 582 bp mRNA linear EST 26-JAN-2001 DEFINITION H3022D12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3022D12 5', mRNA sequence. ACCESSION BG077998 VERSION BG077998.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 582) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3022D12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3022 row: D column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..582 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3022D12-5" /db_xref="taxon:10090" /clone="H3022D12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 141 a 154 c 157 g 130 t ORIGIN 1 cgggagttct gtccgccgct gccggtgccg cggtgtcgcc gggggccacg gtgttgccgg 61 gcaggatgag tgtgatagac cacgtgcggg acatggcggc tgcgggactg cactccaacg 121 tgcggctcct ctcagtctgc tgctcaccat gagtaacaac aaccctgagc tgttttcccc 181 gtcgcagaag taccagctct tggtgtatca tgcagactct ctgtttcacg ataaggagta 241 ccgcaatgct gtgagtaagt acgccatggc tttacagcag aagaaagcct taagtaagac 301 ttccaaagtg cggccttcca ctgggaattc tgcatctact ccacagagtc agtgtcttcc 361 atctgaaatt gaagtgaaat acaaaatggc tgagtgttac acaatgctga agctagacaa 421 ggatgccatt gctgtactcg atgggatccc ttcaagacaa agaactccca aaataaacat 481 gatgctggca aacctgtgca agaaggctgg tcaggagcgc ccatcagtca caagctataa 541 ggaggtcctg cggcagtgcc ctttggccct tgacgccatt ct //