LOCUS BG077349 676 bp mRNA linear EST 12-MAY-2010 DEFINITION H3014D12-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3014D12 5', mRNA sequence. ACCESSION BG077349 VERSION BG077349.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 676) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG077349.1. Other_ESTs: H3014D12-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3014 row: D column: 12 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..676 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3014D12-5" /db_xref="taxon:10090" /clone="H3014D12" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 217 a 152 c 194 g 113 t ORIGIN 1 tagctgtgac ccgggatgag gcagcaaagc ttcagacaaa gaaggtgaag aagccaactg 61 gaacccggaa cctctatctg gccagagaag gcttgatccg cgctgggacg aaggctgctg 121 agggtgtgag tgccgcagat atggccaaac gcgagcggtt tgagctactg aaacatcaga 181 aactcaagaa ccagaatatc tttgtctcgc agaccaggct ttgcctgcac aatctcccaa 241 aggctgtgga cgataaacag ctaaggaagc tgctgctgga ggccactcga ggagagaagg 301 gggttcgaat taaggagtgt agagtcatgc gggaccttaa aggagttcat gggaaaatga 361 agggtcagtc cctgggctat gcctttgcag agttccaaaa gcatgagcat gccctcagag 421 ccctccgcca cttcaacaac aacccagaga tctttgggtc ccaaaagaga cccatagtgg 481 agttctcttt agaagaccga aggaaactta aagtgaagga gctgaggatc caacgcagcc 541 tgcaaaaaat ggaatccaag cctgtgacca gtaagcccca aaaggagcaa aaagaagttg 601 gaaaagacaa gcaacagaaa gtagttcaga gcgccacaca ggatcagagt aaggcgcctg 661 gagagcagaa agggaa //