LOCUS BG076746 602 bp mRNA linear EST 12-MAY-2010 DEFINITION H3005D01-5 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3005D01 5', mRNA sequence. ACCESSION BG076746 VERSION BG076746.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 602) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG076746.1. Other_ESTs: H3005D01-3 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3005 row: D column: 01 Seq primer: -21M13 Reverse POLYA=No. FEATURES Location/Qualifiers source 1..602 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3005D01-5" /db_xref="taxon:10090" /clone="H3005D01" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 186 a 126 c 132 g 158 t ORIGIN 1 ggagccgccc gaccatgaag acaccgtgga aggttcttct gggactgctt ggtgtcgctg 61 cgcttgtcac catcatcacc gtgccaatag ttctgctgag caaagatgaa gcggcagctg 121 acagccgcag aacgtattca ctagctgact atttaaagag tacctttcgg gtcaagtcct 181 actctttgtg gtgggtttca gactttgaat acctctacaa acaagagaac aatatcttgc 241 tgctcaatgc tgaacatgga aacagctcca ttttcttgga gaacagtacc tttgaaagct 301 ttggatatca ttcagtgtca cctgaccgac tgtttgttct cttggaatac aactacgtga 361 agcaatggag acattcctac acagcttcat acaacattta tgatgtgaat aaaagacagc 421 tgatcacaga agagaagatt ccaaataata cacagtggat cacatggtca ccagaaggtc 481 ataagttggc atatgtctgg aagaatgata tttacgttaa agttgaacca cacttaccta 541 gtcataggat cacatcgaca ggagaagaaa atgtaatata taatggaata actgactggg 601 tt //