LOCUS BG075848 743 bp mRNA linear EST 12-MAY-2010 DEFINITION H3152E11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3152E11 3', mRNA sequence. ACCESSION BG075848 VERSION BG075848.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 743) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG075848.1. Other_ESTs: H3152E11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3152 row: E column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..743 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3152E11-3" /db_xref="taxon:10090" /clone="H3152E11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 242 a 161 c 131 g 209 t ORIGIN 1 aatatctaaa caatagtgct ttattgaaaa aggttaattt aaatggatac aaagttgaag 61 tgtgaaatgt tttcaaaata catttctaca agtacaagtt acttcttagt gaaagagcaa 121 gtatctgtta gcaaaagcag taaaactgaa gggggttaga attgtggctg caagacctca 181 caatccacac tgccaatatt agatgtcagc tgacccgaag tagcacctta actcaaaaac 241 atgggactca caccgaatac ttgggaattc tttcattttt ttgtttttaa atttttctcc 301 aacaaactta atgtcaaaat aagccaaaca aaggactgca tgggtactct aaagtcattg 361 acgcttttct tgataggaac ttcacacaat gaacttccct gatcactcac agtgatgcaa 421 tgtgaagagg caaagcgagc aaatgtattt ttcctcatta aatttataaa caaccatgct 481 taagcttcat cttattagta ctactgagtt ttggactgaa ttaaacgtaa atccctgcct 541 catcatcaat caagtccttc ctcctgcagc aaatgaaagc acacagttag cacctgcttt 601 gcttctccac accactgcct ccttcacctg ccccttccct tctaaggtca ctgcctgaca 661 ttagaagaca gggtagaaga gggaagtgcc agaatataaa ccaggcagga ctctgcttgc 721 ctgcttgggg cacagatctg aaa //