LOCUS BG073639 597 bp mRNA linear EST 12-MAY-2010 DEFINITION H3126D03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3126D03 3', mRNA sequence. ACCESSION BG073639 VERSION BG073639.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 597) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG073639.1. Other_ESTs: H3126D03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3126 row: D column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..597 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3126D03-3" /db_xref="taxon:10090" /clone="H3126D03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 217 a 111 c 110 g 159 t ORIGIN 1 gtaggagctt ggttttattg tttcagcaac acaaaaggct gccatctctc tttaaataac 61 aaactataca gatcacaaga agcagaaata cagatggttt ccatgggaac gcacatacgg 121 attcaataaa taatataaaa tgcttttgtg ctaaaataga actcttgtct cctagttaca 181 ggtccatcca tctctgttac cagaagaagc cagatctgct attacttaga acatagaaaa 241 atataattta ataacagaac taaaaaaaag ccagtgttga atttataaac cacatacaat 301 acatataacc acagggcagg tgaaaaatcc aaggaaatgg agggaaaaaa aaatcacagt 361 tgataatcag aatgatggct ccactcccaa gctgctgtca aagatgtttt acatttaggg 421 caaaataaaa agggatggca taggtttctg tttcctggaa ggactcagac tattagaagc 481 cgagacctaa ctctacgcta tggatttgaa ttagctgtaa cgacttctgt ccttcatgaa 541 aggcgaacat ttcgaaccaa gtctctgtgg ctgcttttca attgaaggcc atttaaa //