LOCUS BG070118 600 bp mRNA linear EST 26-JAN-2001 DEFINITION H3083H04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3083H04 3', mRNA sequence. ACCESSION BG070118 VERSION BG070118.1 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 600) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT Other_ESTs: H3083H04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3083 row: H column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..600 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3083H04-3" /db_xref="taxon:10090" /clone="H3083H04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 142 a 89 c 117 g 252 t ORIGIN 1 aatttgtatc actttgatta cttttgttga ctaatgtgaa gggggttgtt tccctaattt 61 ctttttcagc ctgcttatcc tttgtgtaga ggaaggccac tgatttcttt gaattaattt 121 tctttatatg aaaacattga agatgtcttt agacacacca gaagagggct tcagagccta 181 ttacagattt gagttaattt tatatccatc tactttgctg aagttgttta tcaggtttag 241 gagttctctg gtagaatttt gggtgtctct taattatact attcaaatca tctgcaaata 301 gttttagttt gacttcttcc tttctaattt gtatcacttt gattactttt gttgactaat 361 ttctctgact agggcttgga gtactacctt gaataggtag ggagagagtg ggcagccttg 421 tctagtcctt gattttagtg ggattgcttc aagtttctct ccatttagct tgatgttgct 481 tacagattta ctgtatattg cttttactat ttttatgtag ggggtttgaa ttccaagact 541 tttatcttga aagtgtgttg gattttgtca aatgctttct cagcatctga taaaatgatt //