LOCUS BG070080 724 bp mRNA linear EST 12-MAY-2010 DEFINITION H3082E07-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3082E07 3', mRNA sequence. ACCESSION BG070080 VERSION BG070080.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 724) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG070080.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3082 row: E column: 07 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..724 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3082E07-3" /db_xref="taxon:10090" /clone="H3082E07" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 231 a 184 c 159 g 150 t ORIGIN 1 aacacgaaat gccaaaagaa cgcccattca tgcccccatg ctacgttttc cctctccttc 61 agagtaacat tccctgggat gtattaacgt atagagctac cctcattagt tcattcagga 121 ggcatctgag tgggacattg agctcaactc caagtgaggt gtcatgccag gctgtgggct 181 cacgaagcga gtcagatgcg ggcgtttgta acaaagacct tgttctttac ccgcttcttc 241 cttcttccag gacacatgac agatgacact cctgttccaa tttgaagatt ttcccttcat 301 tcgctagtca cattccccac agctgagcag gtgacacaga caagcaataa ctgatcgctg 361 gggacaatag ataataaaag ggagaagata actctaccca ggcagaatgc tgggggacct 421 gagataatgt gaggcaaact cgcaactcag aggctaagag caaggacact gcccaggaga 481 taggcgtacg ccacaggtga gaagataaac agccacataa gcacgcctta tgggatgaag 541 aggggattcg atgcacacag catagctctg ctgaaagatg gtacagatgc aataaaaacc 601 aaaaccctca aactctgttg tcacagatta accagaatca gaaacaaaag tcaaatcaaa 661 ccaacaacca taacaaaccc cgacccaaag gagcaacctc ggactacagt ttcttcacta 721 gcgg //