LOCUS BG069831 718 bp mRNA linear EST 12-MAY-2010 DEFINITION H3080F02-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3080F02 3', mRNA sequence. ACCESSION BG069831 VERSION BG069831.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 718) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG069831.1. Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3080 row: F column: 02 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..718 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3080F02-3" /db_xref="taxon:10090" /clone="H3080F02" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 170 a 152 c 195 g 201 t ORIGIN 1 ctattgtatt ttattatttt agactttttt cagttctatg tttttaaaca tttcacatga 61 acacatcggc acgactgagc ttcacctgct gccaccggag gactttagtt catgcaaaca 121 atgtgttgtg cctggagttc tctcttagtg aataccaggt ggaacatggg gctatttttg 181 acaaagtcaa agttataccc atagaataat gaaatgccat gtagctggga ggacattttc 241 accattacaa atgctctaac tgttaaagga atgctagtgc tttctacctg ggtccccagt 301 gagagtctga ggggcgtgct gggccagcct agggctgatg tgccagggaa aagttagtga 361 tccccaaaac acacacagga gctgatctga tgcaactcac agcagggtct ctattctatt 421 ctcgagctag ctcccccccc cactgtcacg aagaacggtt ttggtggtgg gggagcccgg 481 aatatctatc aggacaagac tttagagtaa gcagcaagca gggagtgtgt gtgcaagcat 541 ctaattggca agctcctgtg acctttagca taattggctg gtgctgggag tgcttctgct 601 ccctctgcat tggtggtcct taggcagggg gtgggcttgt aacctggggt gcaggtttgt 661 tgggggaatc acctggagac actggtcttg ttgggggtgt acctagagac tggagcta //