LOCUS BG068982 666 bp mRNA linear EST 18-DEC-2003 DEFINITION H3071D10-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3071D10 3', mRNA sequence. ACCESSION BG068982 VERSION BG068982.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 666) AUTHORS Kargul,G.J., Dudekula,D.B., Qian,Y., Lim,M.K., Jaradat,S.A., Tanaka,T.S., Carter,M.G. and Ko,M.S.H. TITLE Verification and initial annotation of NIA mouse 15K cDNA clone set JOURNAL Unpublished COMMENT On Jan 26, 2001 this sequence version replaced BG068982.1. Other_ESTs: H3071D10-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3071 row: D column: 10 Seq primer: -21M13 Forward POLYA=No. FEATURES Location/Qualifiers source 1..666 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3071D10-3" /db_xref="taxon:10090" /clone="H3071D10" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 200 a 158 c 142 g 166 t ORIGIN 1 tttctctttc aataagatgg gtgtaaaaat tcatgcctgg agccagcaag atggctcagt 61 gggccaaagg tactatgcat aaaaatctga agatctgaat ctgacctatg gaaccgacct 121 ctgacttcca catgtgtgtg tcctccctcc cattcttctc tctcactctc tctccctcca 181 tctctgtgtg tatccgagtc tgactgtctt tctctctcat acacacaatt atacaatata 241 aataaaaatg aaaatagtaa gaattcaagc ttgtaatatt tttatgaggt tgctacagtg 301 aacaaataaa gaaaaatact ggccacagag cccgtctagc acataaaagg tatccaataa 361 ccaaatacac tctgtcaggt tacttaaagg cccaaggtag aagaaactta agggaaaggc 421 tgtggtttgg ggttgcaggg ggagcctctc tccagaagag aacacaccca cccgccgtga 481 ggtttgaagg aggctcacag cagtaaagac agactctggg tgccctgcag tgggacagaa 541 ggacatgagc tccacagtac tgtttgctca gactgaggct ctagtttctg gacccagaag 601 gagtacaggc ttccttcact cagcagagga aggactccaa tagaaactct aactcaagcc 661 ttctac //