LOCUS BG068293 624 bp mRNA linear EST 12-MAY-2010 DEFINITION H3063H03-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3063H03 3', mRNA sequence. ACCESSION BG068293 VERSION BG068293.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 624) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068293.1. Other_ESTs: H3063H03-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3063 row: H column: 03 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..624 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3063H03-3" /db_xref="taxon:10090" /clone="H3063H03" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 182 a 124 c 125 g 193 t ORIGIN 1 ttttttcttg gtccttaaac taatgaaaca cagggagcca gagcagagcc caaccaagta 61 aaggctaaaa gtccttcctt agtaggcttt ctttcaatgg cactgaaact gagagcttga 121 atagttgaat ttgagacaag agttaggaag agacctggag gagggggttg tctcagaaac 181 tacccacaat aggccctgtg cgtgcacaca aagcctgcag gaatcactga taggtgtgta 241 tctctttgcc ctgtggtttt cagcattcag gacaggtatt ttggttgtct ttattaagtt 301 tgggcaaagg tgccatgata ttagatttag taattaccca tgttgtatga gtcccattcc 361 atatgcaact actatattac tcctcaaaac agattctatt tttctttcca ggaatgagct 421 aaaatatctg cccttgtctc taatgaacta aagaaagctt gttttctatt ctaagtagtt 481 gtcttagtaa tggctccatt ccaggccctc tgaagtttct cacactctgt aagagatacc 541 agttaccctg atagctaaag tcatgtccag taaaatacag acaaaatgac tgaattgata 601 tttctgtaaa aattccagct ctgt //