LOCUS BG068078 742 bp mRNA linear EST 12-MAY-2010 DEFINITION H3061E04-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3061E04 3', mRNA sequence. ACCESSION BG068078 VERSION BG068078.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 742) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG068078.1. Other_ESTs: H3061E04-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3061 row: E column: 04 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..742 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3061E04-3" /db_xref="taxon:10090" /clone="H3061E04" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 224 a 152 c 151 g 215 t ORIGIN 1 aattttcaaa tccagtttta ttaaagttgt ttggcaattt tggtggcagc tcaaggtggt 61 ggcacacatt acacacgagt ctcagttttt gtttgcggga ggtctgggtt cacgcacatc 121 tctaaccccc tgctggtcac taccaagcac caaactgctc tatgcgtccc tagtctccac 181 agcataggaa tttgtcaaat agggttgaaa aaaaaaattc ttgtcaaata ttaagaacat 241 acaaagtata ttaaggattt ccacattgag acttccaggt atgaaaacag acacgtgata 301 gtttgaggtt tcttattttt acttattgat tattagagtt cagagaccag agtgtttcct 361 aaggctgaaa aaaacccacc agaagcccaa gtagagtttc catggacaac ctctccccca 421 cccccaatag agttagagga caaaagaacc tggtccttaa aaacttaaac ttttcaggat 481 agcatttgaa atgtaaatga agtaaatacc taatttaaaa aaatcgagtg actttttctt 541 tagtaggatt ttccacctgc atagctcagg gtattgtttg cttccttagg acacaccctt 601 tgcagtagaa ctgagcatag cctttgttta actgtgtaac tggacagcaa atggtgggtg 661 gcctctctgt ccaagggaaa acattcagag gatcagaaag cgaaacttcc aagggcttgg 721 tgggccctag ttgttctcca gt //