LOCUS BG066535 729 bp mRNA linear EST 12-MAY-2010 DEFINITION H3045A11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3045A11 3', mRNA sequence. ACCESSION BG066535 VERSION BG066535.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 729) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG066535.1. Other_ESTs: H3045A11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3045 row: A column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..729 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3045A11-3" /db_xref="taxon:10090" /clone="H3045A11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 213 a 138 c 158 g 220 t ORIGIN 1 cgaattgaat attttattaa tatggtagtt gtctttttaa catgtgcaga cacactccca 61 cactcagaat catctgcctg ggggaaaaag actaactatg cctaagaaga aaatgaaaaa 121 taaaaaaatt cctgtaggtt ttcattattg taggcaatta tgtccacatc acttacaaag 181 ctattgccaa atctgtccaa ggaagcgaag tttgaaaggg gggcaaaatc ttgggaaaat 241 tcaacagtgg catagcagag ctctcaatat gagaaagctg acataatgtg gacttttgct 301 gtgaattttc tttgcaaagt atggggagag gtttgtcaat gggcagaaag taagagaagg 361 cggtgtgaag taggcttttg cagtcaattt tcctcacagt attgtgcagg gtcatcaaga 421 aaatgcttag tctttctctg gaaccagttt cagaactttt ccaattgcaa tggtcttacc 481 ctcatctctt aaggtaaaac gtcccatctg agggaagtcc ttaaaggtct ccaggcagat 541 ggttcctgct gtccttaaac gcgcaatgca tacttgatct tgttttacaa aacggggtcg 601 agtcttactt ttctctcctg atttcttgtc taccaagcag attaaggctg ttatttcgac 661 ttcttcgata caggtatgaa tatgcagcac cgcattatac cctgggcaga tgatggactt 721 gtgctctat //