LOCUS BG064652 697 bp mRNA linear EST 12-MAY-2010 DEFINITION H3022C11-3 NIA Mouse 15K cDNA Clone Set Mus musculus cDNA clone H3022C11 3', mRNA sequence. ACCESSION BG064652 VERSION BG064652.2 DBLINK BioSample: SAMN00163148 KEYWORDS EST. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 697) AUTHORS Tanaka,T.S., Jaradat,S.A., Lim,M.K., Kargul,G.J., Wang,X., Grahovac,M.J., Pantano,S., Sano,Y., Piao,Y., Nagaraja,R., Doi,H., Wood,W.H. III, Becker,K.G. and Ko,M.S.H. TITLE Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray JOURNAL Proc. Natl. Acad. Sci. U.S.A. 97 (16), 9127-9132 (2000) PUBMED 10922068 COMMENT On Jan 26, 2001 this sequence version replaced BG064652.1. Other_ESTs: H3022C11-5 Contact: George J. Kargul Laboratory of Genetics National Institute on Aging/National Institutes of Health 333 Cassell Drive, Suite 4000, Baltimore, MD 21224-6820, USA Email: cdna@lgsun.grc.nia.nih.gov This clone set has been freely distributed to the community. Please visit http://lgsun.grc.nia.nih.gov/cDNA/15k.html for details. Plate: H3022 row: C column: 11 Seq primer: -21M13 Forward POLYA=Yes. FEATURES Location/Qualifiers source 1..697 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6J" /db_xref="niaEST:H3022C11-3" /db_xref="taxon:10090" /clone="H3022C11" /sex="clones arrayed from a variety of cdna libraries" /clone_lib="SAMN00163148 NIA Mouse 15K cDNA Clone Set" /dev_stage="Clones arrayed from a variety of cDNA libraries" /lab_host="DH10B" /note="Vector: pSPORT1; Site_1: SalI; Site_2: NotI; This clone is among a rearrayed set of 15,247 clones from 11 embryo cDNA libraries (including preimplantation stage embryos from unfertilized egg to blastocyst, embryonic part of E7.5 embryos, extraembryonic part of E7.5 embryos, and E12.5 female mesonephros/gonad) and one newborn ovary cDNA library. Average insert size 1.5 kb. All source libraries are cloned unidirectionally with Oligo(dT)-Not primers. References include: (1) Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray, 2000, Proc. Natl. Acad. Sci. U S A, 97: 9127-9132; (2) Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse develolpment, 2000, Development, 127: 1737-1749; (3) Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome, 1998, Hum Mol Genet 7: 1967-1978." BASE COUNT 207 a 170 c 166 g 154 t ORIGIN 1 gagaaataga aagctatttt attaacacac tttacattta cagttcatta gctaatcaac 61 atcaacatgc aaaaataagc gctagataca aacctctaca atatgggtgt gtgtgaatta 121 caatggttca tttgttttga aaacccgtca gtacttattt tagctgaact atcagtttct 181 gtaatgaaaa gcatgtacac tctaggacta cggaaccacc tggcaaggcc tctgcagaaa 241 ctcagtccag tggctttccc gtgaatacat tctcaaagca ggagataagg cggtgctgga 301 aggtgagatg ctgaacctgt gcagacacac cccagacact ggccacgtgg gcagagctcc 361 tcaagtagca gcccaggtgc atgtggtgca ggcgctttgg cagcagctag acagtgaagt 421 caggaaaggc ctcggcacca cgtcacaagt cactgcagcc aacctggtgt ggccagcacc 481 ttgcccaagc tgtgaccaac aggagttggc aaagggccag cctgctcctc aagctcccct 541 gagtcccatc actagcaaaa ggaaggaaac ggagaaacac agggaaataa ccgatgaacc 601 aattcctact tctgagatgc tctggatttc ctgggtgaac tccaggtcac actgtagaga 661 aagtttcctt tgagaggtgc aagacctgca gagcatc //