LOCUS BC150595 5039 bp mRNA linear HUM 12-MAY-2008 DEFINITION Homo sapiens low density lipoprotein receptor-related protein 5, mRNA (cDNA clone MGC:183505 IMAGE:9056965), complete cds. ACCESSION BC150595 VERSION BC150595.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5039) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5039) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 684 Row: k Column: 11. FEATURES Location/Qualifiers source 1..5039 /db_xref="H-InvDB:HIT000503291" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:183505 IMAGE:9056965" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_364" /lab_host="DH10B" /note="Vector: pCR-XL-TOPO with reversed insert; Clone identification sequence tag: TCCAGACC" gene 1..5039 /gene="LRP5" /gene_synonym="BMND1" /gene_synonym="EVR4" /gene_synonym="HBM" /gene_synonym="LR3" /gene_synonym="OPS" /gene_synonym="OPTA1" /gene_synonym="VBCH2" /db_xref="GeneID:4041" /db_xref="HGNC:HGNC:6697" /db_xref="MIM:603506" CDS 49..4896 /gene="LRP5" /gene_synonym="BMND1" /gene_synonym="EVR4" /gene_synonym="HBM" /gene_synonym="LR3" /gene_synonym="OPS" /gene_synonym="OPTA1" /gene_synonym="VBCH2" /codon_start=1 /product="low density lipoprotein receptor-related protein 5" /protein_id="AAI50596.1" /db_xref="GeneID:4041" /db_xref="HGNC:HGNC:6697" /db_xref="MIM:603506" /translation="MEAAPPGPPWPLLLLLLLLLALCGCPAPAAASPLLLFANRRDVR LVDAGGVKLESTIVVSGLEDAAAVDFQFSKGAVYWTDVSEEAIKQTYLNQTGAAVQNV VISGLVSPDGLACDWVGKKLYWTDSETNRIEVANLNGTSRKVLFWQDLDQPRAIALDP AHGYMYWTDWGETPRIERAGMDGSTRKIIVDSDIYWPNGLTIDLEEQKLYWADAKLSF IHRANLDGSFRQKVVEGSLTHPFALTLSGDTLYWTDWQTRSIHACNKRTGGKRKEILS ALYSPMDIQVLSQERQPFFHTRCEEDNGGCSHLCLLSPSEPFYTCACPTGVQLQDNGR TCKAGAEEVLLLARRTDLRRISLDTPDFTDIVLQVDDIRHAIAIDYDPLEGYVYWTDD EVRAIRRAYLDGSGAQTLVNTEINDPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTSR KILVSEDLDEPRAIALHPVMGLMYWTDWGENPKIECANLDGQERRVLVNASLGWPNGL ALDLQEGKLYWGDAKTDKIEVINVDGTKRRTLLEDKLPHIFGFTLLGDFIYWTDWQRR SIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCADRNGGCSHLCFFTPHATR CGCPIGLELLSDMKTCIVPEAFLVFTSRAAIHRISLETNNNDVAIPLTGVKEASALDF DVSNNHIYWTDVSLKTISRAFMNGSSVEHVVEFGLDYPEGMAVDWMGKNLYWADTGTN RIEVARLDGQFRQVLVWRDLDNPRSLALDPTKGYIYWTEWGGKPRIVRAFMDGTNCMT LVDKVGRANDLTIDYADQRLYWTDLDTNMIESSNMLGQERVVIADDLPHPFGLTQYSD YIYWTDWNLHSIERADKTSGRNRTLIQGHLDFVMDILVFHSSRQDGLNDCMHNNGQCG QLCLAIPGGHRCGCASHYTLDPSSRNCSPPTTFLLFSQKSAISRMIPDDQHSPDLILP LHGLRNVKAIDYDPLDKFIYWVDGRQNIKRAKDDGTQPFVLTSLSQGQNPDRQPHDLS IDIYSRTLFWTCEATNTINVHRLSGEAMGVVLRGDRDKPRAIVVNAERGYLYFTNMQD RAAKIERAALDGTEREVLFTTGLIRPVALVVDNTLGKLFWVDADLKRIESCDLSGANR LTLEDANIVQPLGLTILGKHLYWIDRQQQMIERVEKTTGDKRTRIQGRVAHLTGIHAV EEVSLEEFSAHPCARDNGGCSHICIAKGDGTPRCSCPVHLVLLQNLLTCGEPPTCSPD QFACATGEIDCIPGAWRCDGFPECDDQSDEEGCPVCSAAQFPCARGQCVDLRLRCDGE ADCQDRSDEADCDAICLPNQFRCASGQCVLIKQQCDSFPDCIDGSDELMCEITKPPSD DSPAHSSAIGPVIGIILSLFVMGGVYFVCQRVVCQRYAGANGPFPHEYVSGTPHVPLN FIAPGGSQHGPFTGIACGKSMMSSVSLMGGRGGVPLYDRNHVTGASSSSSSSTKATLY PPILNPPPSPATDPSLYNMDMFYSSNIPATARPYRPYIIRGMAPPTTPCSTDVCDSDY SASRWKASKYYLDLNSDSDPYPPPPTPHSQYLSAEDSCPPSPATERSYFHLFPPPPSP CTDSS" BASE COUNT 1012 a 1641 c 1529 g 857 t ORIGIN 1 atggagcccg agtgagcgcg gcgcgggccc gtccggccgc cggacaacat ggaggcagcg 61 ccgcccgggc cgccgtggcc gctgctgctg ctgctgctgc tgctgctggc gctgtgcggc 121 tgcccggccc ccgccgcggc ctcgccgctc ctgctatttg ccaaccgccg ggacgtacgg 181 ctggtggacg ccggcggagt caagctggag tccaccatcg tggtcagcgg cctggaggat 241 gcggccgcag tggacttcca gttttccaag ggagccgtgt actggacaga cgtgagcgag 301 gaggccatca agcagaccta cctgaaccag acgggggccg ccgtgcagaa cgtggtcatc 361 tccggcctgg tctctcccga cggcctcgcc tgcgactggg tgggcaagaa gctgtactgg 421 acggactcag agaccaaccg catcgaggtg gccaacctca atggcacatc ccggaaggtg 481 ctcttctggc aggaccttga ccagccgagg gccatcgcct tggaccccgc tcacgggtac 541 atgtactgga cagactgggg tgagacgccc cggattgagc gggcagggat ggatggcagc 601 acccggaaga tcattgtgga ctcggacatt tactggccca atggactgac catcgacctg 661 gaggagcaga agctctactg ggctgacgcc aagctcagct tcatccaccg tgccaacctg 721 gacggctcgt tccggcagaa ggtggtggag ggcagcctga cgcacccctt cgccctgacg 781 ctctccgggg acactctgta ctggacagac tggcagaccc gctccatcca tgcctgcaac 841 aagcgcactg gggggaagag gaaggagatc ctgagtgccc tctactcacc catggacatc 901 caggtgctga gccaggagcg gcagcctttc ttccacactc gctgtgagga ggacaatggc 961 ggctgctccc acctgtgcct gctgtcccca agcgagcctt tctacacatg cgcctgcccc 1021 acgggtgtgc agctgcagga caacggcagg acgtgtaagg caggagccga ggaggtgctg 1081 ctgctggccc ggcggacgga cctacggagg atctcgctgg acacgccgga cttcaccgac 1141 atcgtgctgc aggtggacga catccggcac gccattgcca tcgactacga cccgctagag 1201 ggctatgtct actggacaga tgacgaggtg cgggccatcc gcagggcgta cctggacggg 1261 tctggggcgc agacgctggt caacaccgag atcaacgacc ccgatggcat cgcggtcgac 1321 tgggtggccc gaaacctcta ctggaccgac acgggcacgg accgcatcga ggtgacgcgc 1381 ctcaacggca cctcccgcaa gatcctggtg tcggaggacc tggacgagcc ccgagccatc 1441 gcactgcacc ccgtgatggg cctcatgtac tggacagact ggggagagaa ccctaaaatc 1501 gagtgtgcca acttggatgg gcaggagcgg cgtgtgctgg tcaatgcctc cctcgggtgg 1561 cccaacggcc tggccctgga cctgcaggag gggaagctct actggggaga cgccaagaca 1621 gacaagatcg aggtgatcaa tgttgatggg acgaagaggc ggaccctcct ggaggacaag 1681 ctcccgcaca ttttcgggtt cacgctgctg ggggacttca tctactggac tgactggcag 1741 cgccgcagca tcgagcgggt gcacaaggtc aaggccagcc gggacgtcat cattgaccag 1801 ctgcccgacc tgatggggct caaagctgtg aatgtggcca aggtcgtcgg aaccaacccg 1861 tgtgcggaca ggaacggggg gtgcagccac ctgtgcttct tcacacccca cgcaacccgg 1921 tgtggctgcc ccatcggcct ggagctgctg agtgacatga agacctgcat cgtgcctgag 1981 gccttcttgg tcttcaccag cagagccgcc atccacagga tctccctcga gaccaataac 2041 aacgacgtgg ccatcccgct cacgggcgtc aaggaggcct cagccctgga ctttgatgtg 2101 tccaacaacc acatctactg gacagacgtc agcctgaaga ccatcagccg cgccttcatg 2161 aacgggagct cggtggagca cgtggtggag tttggccttg actaccccga gggcatggcc 2221 gttgactgga tgggcaagaa cctctactgg gccgacactg ggaccaacag aatcgaagtg 2281 gcgcggctgg acgggcagtt ccggcaagtc ctcgtgtgga gggacttgga caacccgagg 2341 tcgctggccc tggatcccac caagggctac atctactgga ccgagtgggg cggcaagccg 2401 aggatcgtgc gggccttcat ggacgggacc aactgcatga cgctggtgga caaggtgggc 2461 cgggccaacg acctcaccat tgactacgct gaccagcgcc tctactggac cgacctggac 2521 accaacatga tcgagtcgtc caacatgctg ggtcaggagc gggtcgtgat tgccgacgat 2581 ctcccgcacc cgttcggtct gacgcagtac agcgattata tctactggac agactggaat 2641 ctgcacagca ttgagcgggc cgacaagact agcggccgga accgcaccct catccagggc 2701 cacctggact tcgtgatgga catcctggtg ttccactcct cccgccagga tggcctcaat 2761 gactgtatgc acaacaacgg gcagtgtggg cagctgtgcc ttgccatccc cggcggccac 2821 cgctgcggct gcgcctcaca ctacaccctg gaccccagca gccgcaactg cagcccgccc 2881 accaccttct tgctgttcag ccagaaatct gccatcagtc ggatgatccc ggacgaccag 2941 cacagcccgg atctcatcct gcccctgcat ggactgagga acgtcaaagc catcgactat 3001 gacccactgg acaagttcat ctactgggtg gatgggcgcc agaacatcaa gcgagccaag 3061 gacgacggga cccagccctt tgttttgacc tctctgagcc aaggccaaaa cccagacagg 3121 cagccccacg acctcagcat cgacatctac agccggacac tgttctggac gtgcgaggcc 3181 accaatacca tcaacgtcca caggctgagc ggggaagcca tgggggtggt gctgcgtggg 3241 gaccgcgaca agcccagggc catcgtcgtc aacgcggagc gagggtacct gtacttcacc 3301 aacatgcagg accgggcagc caagatcgaa cgcgcagccc tggacggcac cgagcgcgag 3361 gtcctcttca ccaccggcct catccgccct gtggccctgg tggtagacaa cacactgggc 3421 aagctgttct gggtggacgc ggacctgaag cgcattgaga gctgtgacct gtcaggggcc 3481 aaccgcctga ccctggagga cgccaacatc gtgcagcctc tgggcctgac catccttggc 3541 aagcatctct actggatcga ccgccagcag cagatgatcg agcgtgtgga gaagaccacc 3601 ggggacaagc ggactcgcat ccagggccgt gtcgcccacc tcactggcat ccatgcagtg 3661 gaggaagtca gcctggagga gttctcagcc cacccatgtg cccgtgacaa tggtggctgc 3721 tcccacatct gtattgccaa gggtgatggg acaccacggt gctcatgccc agtccacctc 3781 gtgctcctgc agaacctgct gacctgtgga gagccgccca cctgctcccc ggaccagttt 3841 gcatgtgcca caggggagat cgactgtatc cccggggcct ggcgctgtga cggctttccc 3901 gagtgcgatg accagagcga cgaggagggc tgccccgtgt gctccgccgc ccagttcccc 3961 tgcgcgcggg gtcagtgtgt ggacctgcgc ctgcgctgcg acggcgaggc agactgtcag 4021 gaccgctcag acgaggcgga ctgtgacgcc atctgcctgc ccaaccagtt ccggtgtgcg 4081 agcggccagt gtgtcctcat caaacagcag tgcgactcct tccccgactg tatcgacggc 4141 tccgacgagc tcatgtgtga aatcaccaag ccgccctcag acgacagccc ggcccacagc 4201 agtgccatcg ggcccgtcat tggcatcatc ctctctctct tcgtcatggg tggtgtctat 4261 tttgtgtgcc agcgcgtggt gtgccagcgc tatgcggggg ccaacgggcc cttcccgcac 4321 gagtatgtca gcgggacccc gcacgtgccc ctcaatttca tagccccggg cggttcccag 4381 catggcccct tcacaggcat cgcatgcgga aagtccatga tgagctccgt gagcctgatg 4441 gggggccggg gcggggtgcc cctctacgac cggaaccacg tcacaggggc ctcgtccagc 4501 agctcgtcca gcacgaaggc cacgctgtac ccgccgatcc tgaacccgcc gccctccccg 4561 gccacggacc cctccctgta caacatggac atgttctact cttcaaacat tccggccact 4621 gcgagaccgt acaggcccta catcattcga ggaatggcgc ccccgacgac gccctgcagc 4681 accgacgtgt gtgacagcga ctacagcgcc agccgctgga aggccagcaa gtactacctg 4741 gatttgaact cggactcaga cccctatcca cccccaccca cgccccacag ccagtacctg 4801 tcggcggagg acagctgccc gccctcgccc gccaccgaga ggagctactt ccatctcttc 4861 ccgccccctc cgtccccctg cacggactca tcctgacctc ggccgggcca ctctggcttc 4921 tctgtgcccc tgtaaatagt tttaaatatg aacaaagaaa aaaatatatt ttatgattta 4981 aaaaataaat ataattggga ttttaaaaac atgagaaatg tgaactgtga tggggtggg //