LOCUS BC144062 2161 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens T-box 4, mRNA (cDNA clone MGC:177599 IMAGE:9052582),
complete cds.
ACCESSION BC144062
VERSION BC144062.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2161)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2161)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: I Column: 13.
FEATURES Location/Qualifiers
source 1..2161
/db_xref="H-InvDB:HIT000502496"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177599 IMAGE:9052582"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCTGACTG"
gene 1..2161
/gene="TBX4"
/gene_synonym="SPS"
/db_xref="GeneID:9496"
/db_xref="HGNC:HGNC:11603"
/db_xref="MIM:601719"
CDS 28..1668
/gene="TBX4"
/gene_synonym="SPS"
/codon_start=1
/product="TBX4 protein"
/protein_id="AAI44063.1"
/db_xref="GeneID:9496"
/db_xref="HGNC:HGNC:11603"
/db_xref="MIM:601719"
/translation="MLQDKALSESEEAFRAPGPALGEASAANAPEPALAAPGLSGAAL
GSPPGPGADVVAAAAAEQTIENIKVGLHEKELWKKFHEAGTEMIITKAGRRMFPSYKV
KVTGMNPKTKYILLIDIVPADDHRYKFCDNKWMVAGKAEPAMPGRLYVHPDSPATGAH
WMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNAFGSKNTAFCTHV
FPETSFISVTSYQNHKITQLKIENNPFAKGFRGSDDSDLRVARLQSKEYPVISKSIMR
QRLISPQLSATPDVGPLLGTHQALQHYQHENGAHSQLAEPQDLPLSTFPTQRDSSLFY
HCLKRRADGTRHLDLPCKRSYLEAPSSVGEDHYFRSPPPYDQQMLSPSYCSEVTPREA
CMYSGSGPEIAGVSGVDDLPPPPLSCNMWTSVSPYTSYSVQTMETVPYQPFPTHFTAT
TMMPRLPTLSAQSSQPPGNAHFSVYNQLSQSQVRERGPSASFPRERGLPQGCERKPPS
PHLNAANEFLYSQTFSLSRESSLQYHSGMGTVENWTDG"
BASE COUNT 477 a 653 c 587 g 444 t
ORIGIN
1 actcgttgtg tgctgtgccc gcaggagatg ctgcaggata aggccctgtc cgagagcgag
61 gaggccttcc gggccccggg cccagcgctc ggagaggcca gcgcagccaa cgcccccgag
121 cccgcgctgg cagcgccggg cctcagcgga gccgcgctag gcagcccccc gggacccggg
181 gccgacgtcg tcgccgccgc cgccgcggag cagaccatcg agaacatcaa ggtggggctg
241 catgagaagg agctctggaa gaagttccac gaggcgggca ccgagatgat catcactaag
301 gcgggcagga ggatgttccc cagctacaag gtaaaagtca caggcatgaa ccccaagacc
361 aagtatatcc tgctgattga cattgtccct gccgatgacc atcgctacaa gttctgtgac
421 aacaaatgga tggtggcagg gaaggctgag ccagccatgc caggaaggct gtatgtccac
481 ccggattctc ctgccacagg agcccactgg atgcggcagc tggtctcctt ccagaagctg
541 aagctgacaa acaaccacct ggaccccttt ggccatatca tcctcaactc tatgcacaag
601 taccagccgc ggctccacat cgttaaggct gatgagaaca atgctttcgg ctccaaaaac
661 actgctttct gcacccacgt gttcccagag acctccttca tctctgtgac ctcctaccag
721 aatcacaaga tcacccagct gaaaattgag aacaaccctt ttgccaaggg attccggggc
781 agtgatgaca gtgacctgcg tgtggcccga ctgcagagca aagaataccc cgtgatttcc
841 aaaagcatca tgaggcagag gctcatctcc ccccagctct cagccacacc ggacgtgggc
901 cccctgctcg gcacccacca ggcactccag cactaccagc acgagaacgg ggcacactca
961 cagctcgcgg agccgcagga cctgcccctc agcacctttc ccacccagag ggactcaagc
1021 ctcttctatc actgcctgaa aagacgagca gacggtaccc gccacctgga cttaccttgc
1081 aagcgatcct atctggaagc cccctcttcg gtgggggagg atcactattt ccgttccccc
1141 cctccctacg accagcaaat gctgagcccc tcctactgca gtgaggtgac ccccagagaa
1201 gcatgtatgt actcaggttc agggcccgag attgccgggg tgtctggggt ggacgacctg
1261 cccccacctc cgctgagctg taacatgtgg acttcagtgt cgccgtacac cagctatagc
1321 gtgcagacga tggagactgt gccgtaccag cccttcccca cgcacttcac cgccaccacc
1381 atgatgccgc ggctgcccac cctctccgct cagagctccc agccaccagg aaatgcccac
1441 tttagtgtct acaatcagct ctcccagtct caggttcgag agcgggggcc cagcgcctca
1501 ttcccaagag agcgcggcct cccccaaggg tgtgagagga agccaccctc gccacatcta
1561 aatgctgcca atgagtttct ctactctcaa accttctcct tgtcccgaga atcttcctta
1621 cagtaccatt caggaatggg gactgtggag aactggactg acggatgact ctcacgtctc
1681 ctccatagcc ccgggaccgt gttgctccag tattaacctc tgtgggtggc ctgcactcta
1741 ccaagaaaca caggaaggta ttccagtgtg tgtgtgtgtg tgtgtgtgtg tgtgtgtgtg
1801 tgtgtgtgtg tgtgtgtata cacgagcatg tatgtatttg gagagcatcc atcttctgac
1861 atacaactga ggtcatgaca aggaaaaaaa acaccacatt tatctaagaa gtgattttgg
1921 ctgcaggacc tgggtctatt gttatctgac atctcttgac atgcccgtgg gtgggatggg
1981 agtggagggt tcatatgagt tattgagagg gttttataat ggttgattta ctcaggggcc
2041 aggtggggag ttctctccca tggggaaaga ttctcactgc tggggtggga agattctcgc
2101 tgctggggtg tgaggactct gtgcacacct tagagttcct ggccttctct ttgcaagggg
2161 a
//