LOCUS BC143714 3626 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens solute carrier family 4, sodium bicarbonate
transporter, member 10, mRNA (cDNA clone MGC:177245 IMAGE:9052228),
complete cds.
ACCESSION BC143714
VERSION BC143714.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3626)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3626)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 16 Row: A Column: 16.
FEATURES Location/Qualifiers
source 1..3626
/db_xref="H-InvDB:HIT000502157"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177245 IMAGE:9052228"
/tissue_type="Cerebellum, Lung, PCR rescued clones"
/clone_lib="NIH_MGC_348"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: CAGCATTC"
gene 1..3626
/gene="SLC4A10"
/gene_synonym="NBCn2"
/gene_synonym="NCBE"
/db_xref="GeneID:57282"
/db_xref="HGNC:HGNC:13811"
/db_xref="MIM:605556"
CDS 71..3427
/gene="SLC4A10"
/gene_synonym="NBCn2"
/gene_synonym="NCBE"
/codon_start=1
/product="SLC4A10 protein"
/protein_id="AAI43715.1"
/db_xref="GeneID:57282"
/db_xref="HGNC:HGNC:13811"
/db_xref="MIM:605556"
/translation="MEIKDQGAQMEPLLPTRNDEEAVVDRGGTRSILKTHFEKEDLEG
HRTLFIGVHVPLGGRKSHRRHRHRGHKHRKRDRERDSGLEDGRESPSFDTPSQRVQFI
LGTEDDDEEHIPHDLFTELDEICWREGEDAEWRETARWLKFEEDVEDGGERWSKPYVA
TLSLHSLFELRSCILNGTVLLDMHANTLEEIADMVLDQQVSSGQLNEDVRHRVHEALM
KQHHHQNQKKLTNRIPIVRSFADIGKKQSEPNSMDKNAGQVVSPQSAPACVENKNDVS
RENSTVDFSKGLGGQQKGHTSPCGMKQRHEKGPPHQQEREVDLHFMKKIPPGAEASNI
LVGELEFLDRTVVAFVRLSPAVLLQGLAEVPIPTRFLFILLGPLGKGQQYHEIGRSIA
TLMTDEVFHDVAYKAKDRNDLVSGIDEFLDQVTVLPPGEWDPSIRIEPPKNVPSQEKR
KIPAVPNGTAAHGEAEPHGGHSGPELQRTGRIFGGLILDIKRKAPYFWSDFRDAFSLQ
CLASFLFLYCACMSPVITFGGLLGEATEGRISAIESLFGASMTGIAYSLFGGQPLTIL
GSTGPVLVFEKILFKFCKEYGLSYLSLRASIGLWTATLCIILVATDASSLVCYITRFT
EEAFASLICIIFIYEALEKLFELSEAYPINMHNDLELLTQYSCNCVEPHNPSNGTLKE
WRESNISASDIIWENLTVSECKSLHGEYVGRACGHDHPYVPDVLFWSVILFFSTVTLS
ATLKQFKTSRYFPTKVRSIVSDFAVFLTILCMVLIDYAIGIPSPKLQVPSVFKPTRDD
RGWFVTPLGPNPWWTVIAAIIPALLCTILIFMDQQITAVIINRKEHKLKKGCGYHLDL
LMVAVMLGVCSIMGLPWFVAATVLSITHVNSLKLESECSAPGEQPKFLGIREQRVTGL
MIFILMGSSVFMTSILKFIPMPVLYGVFLYMGASSLKGIQFFDRIKLFWMPAKHQPDF
IYLRHVPLRKVHLFTIIQMSCLGLLWIIKVSRAAIVFPMMVLALVFVRKLMDLLFTKR
ELSWLDDLMPESKKKKLEDAEKEEEQSMLAMEDEGTVQLPLEGHYRDDPSVINISDEM
SKTALWRNLLITADNSKDKESSFPSKSSPS"
BASE COUNT 1048 a 719 c 857 g 1002 t
ORIGIN
1 gtgccgggct gagtgtaaga cactgaagac actgcagagc aaggtgctta ttccagaggc
61 gttacaaaac atggagatta aagaccaggg agcccaaatg gagccgctgc tgcctacgag
121 aaatgatgaa gaagcagttg tggatagagg tggaactcgt tctattctca aaacacactt
181 tgagaaagaa gatttagaag gtcatcgaac actatttatt ggagtacatg tgcccttggg
241 aggaagaaaa agccatcgac gtcacaggca tcgtggtcat aaacacagaa agagagacag
301 agaaagagat tcaggattag aggatggaag ggagtcacct tcttttgaca ccccatcaca
361 gagggtacag tttattcttg gaaccgagga tgatgacgag gaacacattc ctcatgacct
421 tttcacagaa ctggatgaga tttgttggcg tgaaggtgag gacgctgagt ggcgagaaac
481 agccaggtgg ttgaagtttg aagaagatgt ggaagatgga ggagaaaggt ggagcaagcc
541 ttatgtggct actctttcat tgcacagctt gtttgaattg agaagttgta ttctgaatgg
601 aactgtgttg ctggacatgc atgccaacac tttagaagaa attgcagata tggttcttga
661 ccaacaagtg agctcaggtc agctgaatga agatgtacgc catagggtcc atgaggcatt
721 gatgaaacag catcatcatc agaatcagaa aaaactcacc aacaggattc ccattgttcg
781 ttcctttgct gatattggca agaaacagtc agaaccaaat tccatggaca aaaatgcagg
841 tcaggttgtt tctcctcagt ctgctccagc ctgtgttgaa aataaaaatg atgttagcag
901 agaaaacagc actgttgact ttagcaaggg actgggaggc caacaaaagg ggcatactag
961 tccatgtggg atgaaacaaa ggcatgaaaa aggacctcca caccagcaag agagagaggt
1021 tgatctgcat tttatgaaaa agattcctcc aggtgctgaa gcatcgaaca tcttagtggg
1081 agaactggag ttcttggatc gaacagtagt tgcgtttgtc aggttgtctc cagctgtatt
1141 gcttcaagga ctggctgaag tcccaatccc aaccagattt ttgttcattc ttctgggacc
1201 cctgggaaag ggtcaacagt accatgagat tggcagatca attgcaaccc taatgacaga
1261 tgaggtattt catgatgttg cctataaagc taaagatcgt aatgacttgg tatcaggaat
1321 tgatgagttt ctggatcagg ttactgttct ccctcctgga gaatgggatc caagcattcg
1381 aatagagcct cccaaaaatg ttccttccca ggagaagagg aagattcctg ctgtaccaaa
1441 tggaacagca gctcatgggg aagcagagcc ccacggagga catagtggac ctgaactcca
1501 gcgaactgga aggatttttg ggggacttat tttagatatc aaaagaaaag ctccatactt
1561 ctggagtgac ttcagagatg ctttcagcct gcagtgctta gcatcttttc tatttctcta
1621 ctgcgcgtgt atgtctcctg tcatcacgtt tggaggactg ctgggagaag caactgaagg
1681 gcgtataagt gcaattgaat ctctctttgg agcatccatg accgggatag cctattctct
1741 ctttggtgga cagcctctta ccatattagg cagtacagga ccagttttgg tgtttgaaaa
1801 gattttgttt aaattttgca aagaatatgg gctgtcatac ctatctttaa gagctagcat
1861 tggactttgg actgcaactc tatgtatcat acttgtggcc acagatgcta gttcccttgt
1921 ctgctacatc actcggttta ctgaagaagc ttttgcttcc ctgatttgca tcattttcat
1981 ttatgaggcc ctggagaagt tgtttgaact cagtgaagca tatccaatca acatgcataa
2041 tgatctggaa ctgctgacac aatactcgtg taactgtgtg gaaccgcata atcccagcaa
2101 tggcacattg aaggaatgga gggaatccaa tatttctgcc tctgacataa tttgggagaa
2161 cctaactgtg tcagaatgca aatcattgca tggagagtat gttggacggg cctgtggcca
2221 tgatcaccca tatgttccag atgttctatt ttggtctgtg atcctgttct tttccacagt
2281 tactctgtca gccaccctga agcagttcaa gactagcaga tattttccaa ccaaggttcg
2341 atccatagtg agtgactttg ctgtctttct tacaattctg tgtatggttt taattgacta
2401 tgccattggg atcccatctc caaaactaca agtaccaagt gttttcaagc ccactagaga
2461 tgatcgtggc tggtttgtta cgcctttagg tccaaaccca tggtggacag taatagctgc
2521 tataattcca gctctgcttt gtactattct aatttttatg gaccaacaga ttacagctgt
2581 catcatcaac aggaaagagc ataagctaaa gaaaggttgt gggtaccatc tggacctatt
2641 aatggtggct gtcatgctcg gtgtatgctc catcatgggc ctgccatggt ttgtggctgc
2701 cacagtcctc tccatcactc atgtcaatag cctaaaactg gaatcagaat gctcagctcc
2761 aggagaacaa cccaaatttc tcggcattcg ggagcaaagg gttactgggc ttatgatttt
2821 tattcttatg ggttcatcag tctttatgac cagtattctg aagtttattc ccatgccagt
2881 gctatatgga gtgtttcttt atatgggtgc ttcatctcta aagggaattc agttctttga
2941 taggataaag ctcttctgga tgccggcaaa acatcaacca gattttatat acctaaggca
3001 cgtaccgctt cgaaaagtgc atctcttcac aattattcag atgagttgcc ttggcctttt
3061 gtggataata aaagtttcaa gagctgctat tgtctttccc atgatggtgt tagccctggt
3121 atttgtaaga aagttgatgg acttgttgtt cacgaagcgg gaactcagct ggttggatga
3181 tttgatgccc gagagtaaga aaaagaaact ggaagatgct gaaaaagaag aagaacaaag
3241 tatgctagct atggaagatg agggcacagt acaactccca ttggaagggc actatagaga
3301 tgatccatct gtgatcaata tatctgatga aatgtcaaag actgccttgt ggaggaacct
3361 tctgattact gccgataact caaaagataa ggagtcaagc tttccttcca aaagctcccc
3421 ttcctaatca ctctagaagc tgattcccca aagcattgaa agccgaaaag agaagaaagc
3481 tgactcaggg aaaggtgttg acagggagac ttgtctatga ctcgatcttc aatttatttt
3541 ttacatatat atgagaagag tgtcacaatt attaataaaa ctgctttgat catgtattgt
3601 aaattctgtc cctcaaccca aatcca
//