LOCUS BC142648 1875 bp mRNA linear HUM 25-JUL-2007
DEFINITION Homo sapiens nuclear receptor co-repressor 1, mRNA (cDNA clone
IMAGE:40147982), partial cds.
ACCESSION BC142648
VERSION BC142648.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1875)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1875)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: f Column: 6.
FEATURES Location/Qualifiers
source 1..1875
/db_xref="H-InvDB:HIT000435351"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40147982"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..>1875
/gene="NCOR1"
/gene_synonym="hCIT529I10"
/gene_synonym="hN-CoR"
/gene_synonym="N-CoR"
/gene_synonym="TRAC1"
/db_xref="GeneID:9611"
/db_xref="HGNC:HGNC:7672"
/db_xref="MIM:600849"
CDS 224..>1875
/gene="NCOR1"
/gene_synonym="hCIT529I10"
/gene_synonym="hN-CoR"
/gene_synonym="N-CoR"
/gene_synonym="TRAC1"
/codon_start=1
/product="NCOR1 protein"
/protein_id="AAI42649.1"
/db_xref="GeneID:9611"
/db_xref="HGNC:HGNC:7672"
/db_xref="MIM:600849"
/translation="MSSSGYPPNQGAFSTEQSRYPPHSVQYTFPNTRHQQEFAVPDYR
SSHLEVSQASQLLQQQQQQQLRRRPSLLSEFHPGSDRPQERRTSYEPFHPGPSPVDHD
SLESKRPRLEQVSDSHFQRVSAAVLPLVHPLPEGLRASADAKKDPAFGGKHEAPSSPI
SGQPCGDDQNASPSKLSKEELIQSMDRVDREIAKVEQQILKLKKKQQQLEEEAAKPPE
PEKPVSPPPVEQKHRSIVQIIYDENRKKAEEAHKIFEGLGPKVELPLYNQPSDTKVYH
ENIKTNQVMRKKLILFFKRRNHARKQREQKICQRYDQLMEAWEKKVDRIENNPRRKAK
ESKTREYYEKQFPEIRKQREQQERFQRVGQRGAGLSATIARSEHEISEIIDGLSEQEN
NEKQMRQLSVIPPMMFDAEQRRVKFINMNGLMEDPMKVYKDRQFMNVWTDHEKEIFKD
KFIQHPKNFGLIASYLERKSVPDCVLYYYLTKKNENYKALVRRNYGKRRGRNQQIARP
SQEEKVEEKEEDKAEKKKKKKKKKKKKKKKKKKKKKKKKKKK"
BASE COUNT 655 a 391 c 433 g 396 t
ORIGIN
1 gtggcgaagc agcagccgcg gcggcggcgg cggctggagt gagcgtccga ctcgccgcgc
61 cgaacgaggt cccggtgtag ggccgcgcgc cgtggccgcg tcccactcct caggccgggg
121 cgcacgtcgg ctcccacgct tagccagctc ccggtggttt cctagaaaca tgattgttta
181 ttggcattga tctcacagtc tggtgaggac ttctttactg ataatgtcaa gttcaggtta
241 tcctcccaac caaggagcat tcagcacaga acaaagtcgt tatcctcctc actctgtcca
301 gtatacattt cccaacaccc gccaccagca ggagttcgca gtccctgatt atcgttcctc
361 tcatcttgaa gtgagtcagg catcacagct tttgcagcaa cagcagcagc aacagcttcg
421 aaggcgacct tccttgcttt cagaatttca cccaggttct gacaggcctc aagaaaggag
481 aactagttat gaaccgtttc atccaggccc atccccagtg gatcatgatt cactggaatc
541 gaagcgacca cgtctggaac aggtttctga ttctcatttt cagcgtgtca gtgctgcggt
601 tttgccttta gtgcacccgc tgccagaagg gctgagggct tctgcagatg ctaagaagga
661 tccagcattc ggaggcaaac atgaagctcc atcctctcca atttcggggc aaccatgtgg
721 agatgatcaa aatgcttcac cttcaaaact ctcaaaggaa gagttaatac agagtatgga
781 tcgtgtagat cgagaaattg caaaagtaga acagcagatc cttaaactga aaaagaaaca
841 acaacagctt gaagaagagg cagctaaacc tcctgagcct gagaagcccg tgtcccctcc
901 tcctgtggag cagaaacacc gcagtattgt ccaaattatt tatgatgaga atcggaaaaa
961 agcagaagaa gctcataaaa tttttgaagg tcttggccca aaagttgaac tgccactgta
1021 taaccagcca tcagatacca aggtgtacca tgagaacatc aagacaaacc aggtgatgag
1081 gaaaaaactc attttatttt ttaaaagaag aaatcatgca agaaaacaaa gggaacaaaa
1141 aatctgccag cgttatgatc agctcatgga ggcatgggag aaaaaagtgg acagaataga
1201 aaataatcct cggaggaaag ctaaagaaag caaaacaagg gaatactatg aaaagcagtt
1261 tccagaaatt cgaaaacaaa gagaacagca agaaagattt cagcgagttg ggcagagggg
1321 agctggtctt tcagccacca ttgctaggag tgagcatgag atttctgaaa ttattgatgg
1381 gctctctgag caggagaata atgagaaaca aatgcggcag ctctctgtga ttccacctat
1441 gatgtttgat gcagaacaaa gacgagtcaa gttcattaac atgaatgggc ttatggagga
1501 ccctatgaaa gtgtataaag ataggcagtt tatgaatgtt tggactgacc atgaaaagga
1561 gatctttaag gacaagttta tccagcatcc aaaaaacttt ggactaattg catcatactt
1621 ggagaggaag agtgttcctg attgtgtttt gtattactat ttaaccaaga aaaatgagaa
1681 ttataaagcc ctcgtcagaa ggaattatgg gaaacgcaga ggcagaaacc agcaaattgc
1741 tcgaccctcg caagaagaaa aagtagaaga aaaagaagag gataaagcag aaaaaaaaaa
1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1861 aaaaaaaaaa aaaaa
//