LOCUS BC137106 1118 bp mRNA linear HUM 30-JUN-2008 DEFINITION Homo sapiens early B-cell factor 2, mRNA (cDNA clone IMAGE:9021103), complete cds. ACCESSION BC137106 VERSION BC137106.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1118) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1118) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 672 Row: e Column: 5 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1118 /db_xref="H-InvDB:HIT000501074" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:9021103" /tissue_type="Lung, PCR rescued clones" /clone_lib="NIH_MGC_299" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CTCTGCTA" gene 1..1118 /gene="EBF2" /gene_synonym="COE2" /gene_synonym="EBF-2" /gene_synonym="O/E-3" /gene_synonym="OE-3" /db_xref="GeneID:64641" /db_xref="HGNC:HGNC:19090" /db_xref="MIM:609934" CDS 266..820 /gene="EBF2" /gene_synonym="COE2" /gene_synonym="EBF-2" /gene_synonym="O/E-3" /gene_synonym="OE-3" /codon_start=1 /product="EBF2 protein" /protein_id="AAI37107.1" /db_xref="GeneID:64641" /db_xref="HGNC:HGNC:19090" /db_xref="MIM:609934" /translation="MFGIQDTLGRGPTLKEKSLGAEMDSVRSWVRNVGVVDANVAAQS GVALSRAHFEKQPPSNLRKSNFFHFVLALYDRQGQPVEIERTAFVDFVENDKEQGNEK TNNGTHYKLQLLYSNGVRTEQDLYVRLIDSVTKQPIAYEGQNKNPEMCRVLLTHEVMC SRCCEKKSCGNRNETPSDPVIIDR" BASE COUNT 284 a 257 c 297 g 280 t ORIGIN 1 cgagcgacct agggtggagt ggctgaggcg gcagatctga acttgcggag gataagaacc 61 caaactttga ctacatcagt ccgcacctcg ccagtgaagc aaaggacggg ttatcttttt 121 tttttttcta agactcaaac ttgggcactt gatccctttt cttggattgc tttggaggag 181 acgatttgct ggcaacgttg ggaacagtca ggactgtgtt gtaactctta cttttaaagc 241 gacagtagag gatcagactt tttaaatgtt tggaattcaa gatactttag gaagaggacc 301 aactctgaaa gagaaatcgc tgggcgcgga gatggattcg gtcaggtcct gggtccggaa 361 tgtcggagtg gtggacgcta atgtcgccgc gcagagcggg gtcgccctgt cccgggccca 421 ctttgagaaa cagcctcctt ccaacttgag gaaatccaac ttctttcact tcgtcctggc 481 gctctatgac aggcagggcc agccggtgga gatcgagcgg acggccttcg tggactttgt 541 ggagaatgac aaagaacaag gcaacgagaa gaccaacaac ggcactcact acaagttaca 601 gctcctctac agcaacggtg tccgcacgga acaggacctc tatgtcaggc tcatcgactc 661 ggtcaccaag cagcccatcg cttacgaggg acagaataag aatccggaaa tgtgccgagt 721 tctcctgacg cacgaagtga tgtgtagtcg atgctgcgaa aagaaaagct gtggaaaccg 781 aaatgagact ccatcggacc cagtcataat tgacaggtag ggggaaaaag tgatttttca 841 atcatttttg gttccttttc ttcatgaacc tcaactctga gtactgatcc atggagcttt 901 gctgtcaagt tggtttcatg ttatttcaag tcactaaggt catccaacaa aggcctcctc 961 atgctggcct ttcttggaag aagccagaat cttcctttgg aacacgtgtc tctaaatctg 1021 tggtggagtc ttttccaggt gcaccagctt cagcctaata agtagtatgt gtggtgcagg 1081 atataagcga tggcacctct cctttcgggc agggtatg //