LOCUS BC136623 4183 bp mRNA linear HUM 11-FEB-2009 DEFINITION Homo sapiens papilin, proteoglycan-like sulfated glycoprotein, mRNA (cDNA clone MGC:168236 IMAGE:9020613), complete cds. ACCESSION BC136623 VERSION BC136623.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4183) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4183) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Ambion cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 670 Row: p Column: 19 single stranded. FEATURES Location/Qualifiers source 1..4183 /db_xref="H-InvDB:HIT000500633" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:168236 IMAGE:9020613" /tissue_type="Testicle, PCR rescued clones" /clone_lib="NIH_MGC_382" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CGTCACCA" gene 1..4183 /gene="PAPLN" /db_xref="GeneID:89932" /db_xref="HGNC:HGNC:19262" CDS 21..2447 /gene="PAPLN" /codon_start=1 /product="PAPLN protein" /protein_id="AAI36624.1" /db_xref="GeneID:89932" /db_xref="HGNC:HGNC:19262" /translation="MRLLLLVPLLLAPAPGSSAPKVRRQSDTWGPWSQWSPCSRTCGG GVSFRERPCYSQRRDGGSSCVGPARSHRSCRTESCPDGARDFRAEQCAEFDGAEFQGR RYRWLPYYSAPNKCELNCIPKGENFYYKHREAVVDGTPCEPGKRDVCVDGSCRVVGCD HELDSSKQEDKCLRCGGDGTTCYPVAGTFDANDLSRGYNQILIVPMGATSILIDEAAA SRNFLAVKNVRGEYYLNGHWTIEAARALPAASTILHYERGAEGDLAPERLHARGPTSE PLVIELISQEPNPGVHYEYHLPLRRPSPGFSWSHGSWSDCSAECGGGHQSRLVFCTID HEAYPDHMCQRQPRPADRRSCNLHPCPETKRWKAGPWAPCSASCGGGSQSRSVYCISS DGAGIQEAVEEAECAGLPGKPPAIQACNLQRCAAWSPEPWGECSVSCGVGVRKRSVTC RGERGSLLHTAACSLEDRPPLTEPCVHEDCPLLSDQAWHVGTWGLCSKSCSSGTRRRQ VICAIGPPSHCGSLQHSKPVDVEPCNTQPCHLPQEVPSMQDVHTPASNPWMPLGPQES PASDSRGQWWAAQEHPSARGDHRGERGDPRGDQGTHLSALGPAPSLQQPPYQQPLRSG SGPRDCRHSPHGCCPDGHTASLGPQWQGCPGAPCQQSRYGCCPDRVSVAEGPHHAGCT KSYGGDSTGGMPRSRAVASTVHNTHQPQAQQNEPSECRGSQFGCCYDNVATAAGPLGE GCVGQPSHGLAWQVWSPRWCRQPWGSWCGSPAQTTLPRNPRLPGRKMASPSPLTGVCD GPPTSSDRCV" BASE COUNT 769 a 1319 c 1277 g 818 t ORIGIN 1 gccagcgaag acaggctgag atgcggctgc tcctgctcgt gccgctgctg ctggctccag 61 cgcccgggtc ctcggctccc aaggtgaggc ggcagagtga cacctgggga ccctggagcc 121 agtggagccc ctgcagccgg acctgtggag ggggtgtcag cttccgggag cgcccctgct 181 actcccagag gagagatgga ggctccagct gcgtgggccc cgcccggagc caccgctctt 241 gtcgcacgga gagctgcccc gacggcgccc gggacttccg ggccgagcag tgcgcggagt 301 tcgacggagc ggagttccag gggcggcggt atcggtggct gccctactac agcgccccaa 361 acaagtgtga actgaactgc attcccaagg gggagaactt ctactacaag cacagggagg 421 ctgtggttga tgggacgccc tgcgagcctg gcaagaggga tgtctgtgtg gatggcagct 481 gccgggttgt cggctgtgat cacgagctgg actcgtccaa gcaggaggac aagtgtctgc 541 ggtgtggggg tgacggcacg acctgctacc ccgtcgcagg cacctttgac gctaatgacc 601 tcagccgagg ctacaaccag atcctcatag ttcccatggg tgccaccagc atcctcatcg 661 acgaggctgc tgccagcagg aacttcctgg ctgtgaagaa tgttcgtggg gaatactacc 721 tcaatgggca ctggaccatc gaggcggccc gggccctgcc agcagccagc accatcctgc 781 attacgagcg gggtgctgag ggggacctgg cccctgagcg actccatgcc cggggcccca 841 cctcggagcc cctggtcatc gagctcatca gccaggagcc caaccccggt gtgcactatg 901 agtaccacct gcccctgcgc cgccccagcc ccggcttcag ctggagccac ggctcatgga 961 gtgactgcag cgcggagtgt ggcggaggtc accagtcccg cctggtgttc tgcaccatcg 1021 accatgaggc ctaccccgac cacatgtgcc agcgccagcc acggccagct gaccggcgtt 1081 cctgcaatct tcacccttgc ccggagacca agcgctggaa ggcagggcca tgggcaccct 1141 gctcagcctc ctgtggagga ggctcccagt cccgctccgt gtactgcatc tcgtctgacg 1201 gggccggcat ccaggaggcc gtggaggagg ctgagtgtgc cgggctgcct gggaagcccc 1261 ctgccattca ggcctgtaac ctgcagcgct gtgcagcctg gagcccggag ccctggggag 1321 agtgttctgt cagttgtggc gttggcgtcc ggaagcggag cgttacttgc cggggtgaaa 1381 ggggttcttt gctccatacc gcagcgtgct ccttggaaga ccggccacct ctgactgagc 1441 cctgtgtgca tgaggactgc cccctcctca gtgaccaggc ctggcatgtt ggcacctggg 1501 gtctatgctc caagagctgc agctcgggca ctcggaggcg acaggtcatc tgtgccattg 1561 ggccgcccag ccactgcggg agcctgcagc actccaagcc tgtggatgtg gagccttgta 1621 acacgcagcc ctgtcatctc ccccaggagg tccccagcat gcaggatgtg cacacccctg 1681 ccagcaaccc ctggatgccg ttgggccctc aggagtcccc tgcctcagac tccagaggcc 1741 agtggtgggc agcccaggaa cacccctcag ccaggggtga ccacagggga gaacgaggtg 1801 accccagggg cgaccaaggc acccacctgt cagccctggg ccccgctccc tctctgcagc 1861 agcccccata ccagcaaccc ctgcggtcgg gctcagggcc ccgcgactgc agacacagtc 1921 ctcacgggtg ctgccccgat ggccacacgg catctctcgg gcctcagtgg caaggctgcc 1981 ctggggcccc ctgtcagcag agcaggtacg ggtgctgccc tgacagggta tctgtcgctg 2041 aggggcccca tcacgctggc tgcacaaagt cgtatggtgg tgacagcacc gggggcatgc 2101 ccaggtcaag ggcagtggct tctacagtcc acaacaccca ccagccccag gcccagcaga 2161 atgagcccag tgagtgccgg ggctcccagt ttggctgttg ctatgacaac gtggccactg 2221 cagccggtcc tcttggggaa ggctgtgtgg gccagcccag ccatggatta gcttggcagg 2281 tgtggagccc tcgttggtgc aggcagccct ggggcagttg gtgcggctct cctgctcaga 2341 cgacactgcc ccggaatccc aggctgcctg gcagaaagat ggccagccca tctcctctga 2401 caggtgtgtg tgacggcccc ccgacctcct ctgacaggtg tgtgtgacgg ccccccgacc 2461 tcctctgaca ggttcacgtg acagctccct ccacctccgc tgacaggcac aggctgcagt 2521 tcgacggatc cctgatcatc caccccctgc aggcagagga cgcgggcacc tacagctgtg 2581 gcagcacccg gccaggccgc gactcccaga agatccaact tcgcatcata gggggtgaca 2641 tggccgtgct gtctgaggct gagctgagcc gcttccctca gcccagggac ccagctcagg 2701 actttggcca agcgggggct gctgggcccc tgggggccat cccctcttca cacccacagc 2761 ctgcaaacag gctgcgtttg gaccagaacc agccccgggt ggtggatgcc agtccaggcc 2821 agcggatccg gatgacctgc cgtgccgaag gcttcccgcc cccagccatc gagtggcaga 2881 gagatgggca gcctgtctct tctcccagac accagctgca gcctgatggc tccctggtca 2941 ttagccgagt ggctgtagaa gatggcggct tctacacctg tgtcgctttc aatgggcagg 3001 accgagacca gcgatgggtc cagctcagag ttctggggga gctgacaatc tcaggactgc 3061 cccctactgt gacagtgcca gagggtgata cggccaggct attgtgtgtg gtagcaggag 3121 aaagtgtgaa catcaggtgg tccaggaacg ggctacctgt gcaggctgat ggccaccgtg 3181 tccaccagtc cccagatggc acgctgctca tttacaactt gcgggccagg gatgagggct 3241 cctacacgtg cagtgcctac caggggagcc aggcagtcag ccgcagcacc gaggtgaagg 3301 tggtctcacc agcacccacc gcccagccca gggaccctgg cagggactgc gtcgaccagc 3361 cagagctggc caactgtgat ttgatcctgc aggcccagct ttgtggcaat gagtattact 3421 ccagcttctg ctgtgccagc tgttcacgtt tccagcctca cgctcagccc atctggcagt 3481 agggatgaag gctagttcca gccccagtcc aaaatagttc atagggctag ggagaaagga 3541 agatggactc ttggcttcct ctctctggct ggcaaaggga gttatcttct ggaatacatt 3601 agctctttca aaaacccacc cagtgtttag cctcaacggc agccagttac cagcttctct 3661 ctgtagcctt cagcagtgtt tgcatctctg acataaccac aggctgctgt tttcaagaag 3721 agcaatctgt ttggataaga aaaaccttta ctttacagct tccctttata atttgttaca 3781 caggaatagt taaatgcatt tgtttgtttg ttttttgaga cggagtttca ctcttgttgc 3841 ccaggctgga gggcaatggc gcgatctcgg ctcactgcaa cctccgtctc ctgggttctt 3901 gattctcctg tgtcagcctt ctgagtggct gggattacag atgcctatca ccatgcctgg 3961 gtaatttttg tatttttagt tgagatgggg tttcaccatg ttggccaggc tggtctcgaa 4021 cttctgacct cagatgatct gcccgcctca gcctcccaaa gtgctgggat tacgggcatg 4081 agccaccacg cccagccatc aatgcatttt ttttattttt tttttgagac agagtttcgc 4141 acttcttgcc caggctggag tacaatggtg cgatcttggc tca //