LOCUS BC136270 5112 bp mRNA linear HUM 11-FEB-2009 DEFINITION Homo sapiens nuclear protein, ataxia-telangiectasia locus, mRNA (cDNA clone MGC:167880 IMAGE:9020257), complete cds. ACCESSION BC136270 VERSION BC136270.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5112) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5112) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Ambion cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 670 Row: a Column: 23 single stranded. FEATURES Location/Qualifiers source 1..5112 /db_xref="H-InvDB:HIT000500302" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:167880 IMAGE:9020257" /tissue_type="Testicle, PCR rescued clones" /clone_lib="NIH_MGC_382" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CCCATTCC" gene 1..5112 /gene="NPAT" /gene_synonym="E14" /db_xref="GeneID:4863" /db_xref="HGNC:HGNC:7896" /db_xref="MIM:601448" CDS 24..4307 /gene="NPAT" /gene_synonym="E14" /codon_start=1 /product="nuclear protein, ataxia-telangiectasia locus" /protein_id="AAI36271.1" /db_xref="GeneID:4863" /db_xref="HGNC:HGNC:7896" /db_xref="MIM:601448" /translation="MLLPSDVARLVLGYLQQENLISTCQTFILESSDLKEYAEHCTDE GFIPACLLSLFGKNLTTILNEYVAMKTKETSNNVPAIMSSLWKKLDHTLSQIRSMQSS PRFAGSQRARTRTGIAEIKRQRKLASQTAPASAELLTLPYLSGQFTTPPSTGTQVTRP SGQISDPSRSYFVVVNHSQSQDTVTTGEALNVIPGAQEKKAHASLMSPGRRKSESQRK STTLSGPHSTIRNFQDPNAFAVEKQMVIENAREKILSNKSLQEKLAENINKFLTSDNN IAQVPKQTDNNPTEPETSIDEFLGLPSEIHMSEEAIQDILEQTESDPAFQALFDLFDY GKTKNNKNISQSISSQPMESNPSIVLADETNLAVKGSFETEESDGQSGQPAFCTSYQN DDPLNALKNSNNHDVLRQEDQENFSQISTSIQKKAFKTAVPTEQKCDIDITFESVPNL NDFNQRGNSNAECNPHCAELYTNQMSTETEMAIGIEKNSLSSNVPSESQLQPDQPDIP ITSFVSLGCEANNENLILSGKSSQLLSQDTSLTGKPSKKSQFCENSNDTVKLKINFHG SKSSDSSEIHKSKIEINVLEPVMSQLSNCQDNSCLQSEILPVSVESSHLNVSGQVEIH LGDSLSSTKQPSNDSASVELNHTENEAQASKSENSQEPSSSVKEENTIFLSLGGNANC EKVALTPPEGTPVENSHSLPPESVCSSVGDSHPESQNTDDKPSSNNSAEIDASNIVSL KVIISDDPFVSSDTELTSAVSSINGENLPTIILSSPTKSPTKNAELVKCLSSEETVGA VVYAEVGDSASMEQSLLTFKSEDSAVNNTQNEDGIAFSANVTPCVSKDGGYIQLMPAT STAFGNSNNILIATCVTDPTALGTSVSQSNVVVLPGNSAPMTAQPLPPQLQTPPRSNS VFAVNQAVSPNFSQGSAIIIASPVQPVLQGMVGMIPVSVVGQNGNNFSTPPRQVLHMP LTAPVCNRSIPQFPVPPKSQKAQGLRKKPCIGKQVNNLVDSSGHSVGCHAQKTEVSDK SIATDLGKKSEETTVPFPEESIVPAAKPCHRRVLCFDSTTAPVANTQGPNHKMVSQNK ERNAVSFPNLDSPNVSSTLKPPSNNAIKREKEKPPLPKILSKSESAISRHTTIRETQS EKKVSPTEIVLESFHKATANKENELCSDVERQKNPENSKLSIGQQNGGLRSEKSIASL QEMTKKQGTSSNNKNVLSVGTAVKDLKQEQTKSASSLITTEMLQDIQRHSSVSRLADS SDLPVPRTPGSGAGEKHKEEPIDIIKAPSSRRFSEDSSTSKVMVPPVTPDLPACSPAS ETGSENSVNMAAHTLMILSRAAISRTTSATPLKDNTQQFRASSRSTTKKRKIEELDER ERNSRPSSKNLTNSSIPMKKKKIKKKKLPSSFPAGMDVDKFLLSLHYDE" BASE COUNT 1722 a 1040 c 917 g 1433 t ORIGIN 1 tggttcctgc tgtggttttg atcatgttgt taccctcgga cgtagcccgg cttgtattgg 61 gttacttaca gcaagaaaac ctcatttcta cctgccagac ttttattttg gaaagttcag 121 atttaaaaga atatgcagaa cattgtacag atgaagggtt tattccagcc tgcttactgt 181 ccttatttgg aaaaaacttg acaacaattt taaatgagta tgtagctatg aaaacaaaag 241 aaacatcaaa taatgtccca gcaataatgt catctctatg gaagaaattg gaccatacac 301 tttctcagat caggagcatg caaagttccc caaggtttgc tggcagtcag agagcccgaa 361 cgagaactgg aattgcagaa atcaaacggc agagaaagct tgcatctcaa acagctccag 421 ccagtgcaga gttgctcact ttaccttacc tttcaggaca gtttaccact cctccttcca 481 caggtacaca ggttactcga ccaagtggcc aaatttcaga tccatcgagg tcatattttg 541 tagtggtcaa ccactcacag tcacaagata ctgtaaccac tggagaagct ttaaatgtca 601 ttcctggtgc tcaggaaaag aaagcacatg ccagtttaat gtctcccggt agacgcaaaa 661 gtgaatctca gagaaaaagt accactttgt ctggccctca ttcaacaata cggaatttcc 721 aagatccaaa cgcttttgca gtagaaaaac aaatggttat tgaaaatgca cgagaaaaaa 781 tactaagcaa caaatctctt caagaaaagc tagcagaaaa cataaataaa tttttaacta 841 gtgataacaa tattgcccaa gtacctaagc aaacagataa caaccctacg gagccagaga 901 cttcaattga tgaattccta ggacttccga gtgaaattca catgtctgaa gaagctatac 961 aggacatatt ggaacagaca gaatcagacc cagcatttca ggcactcttt gatctctttg 1021 actatggcaa aacaaagaat aataaaaata tatcacaaag tatttccagt caacctatgg 1081 aatccaatcc cagtatagtc ttagcagatg aaactaatct agcagttaaa ggttcttttg 1141 aaacagaaga atctgatggt cagtctggtc agcccgcttt ttgtacatcc tatcagaatg 1201 atgacccatt aaatgctttg aagaatagca acaaccatga tgtgcttaga caagaagacc 1261 aggaaaattt ttcccaaata agtaccagca tacagaaaaa ggcctttaaa acagctgtac 1321 ccactgaaca gaagtgtgac attgacatta cctttgagtc cgtgcctaat ttgaatgact 1381 ttaaccaaag agggaattct aatgctgaat gtaatccaca ttgtgctgaa ttatacacca 1441 atcagatgtc cactgaaact gaaatggcta tagggattga aaagaactct ttgtcttcaa 1501 atgtaccgag tgaatctcag ttacagcctg atcagcctga tataccaata acttcatttg 1561 tttcacttgg ttgtgaagct aacaatgaaa acttaattct ctctgggaag agttctcaac 1621 ttttatccca agatacttca ttaactggaa agccatctaa aaaaagtcaa ttttgtgaaa 1681 attctaatga tacagtaaaa cttaaaatta attttcatgg ttccaagtca tcagattcta 1741 gtgaaattca caagagtaaa atagaaatta atgtgttaga accagttatg tcacagctat 1801 caaattgcca agataattct tgtcttcaaa gtgaaatact acctgtgtct gttgaaagtt 1861 cacatttaaa tgtatctgga caagtagaaa ttcatcttgg agattcgctg tcttctacta 1921 aacaaccatc taatgattca gcatctgttg agttaaatca tacagaaaat gaagctcagg 1981 catccaagtc tgagaattca caggagcctt catcttctgt aaaagaagag aatactattt 2041 ttctctcttt aggtggaaat gctaactgtg agaaagttgc actgacgcct ccagaaggca 2101 ctcctgtaga aaacagtcac tctcttcctc cagaatctgt gtgttcttca gtgggagatt 2161 ctcaccctga gtcccaaaat actgatgata aaccttctag caacaactca gcagagatag 2221 atgcatcaaa tatcgtctct ctcaaagtta tcattagtga tgatccattt gtttcctcag 2281 atactgaact taccagtgct gtttctagta ttaatggaga aaacctgcca actataatct 2341 tgtcttctcc tactaaatca cctactaaaa atgcagaact agttaaatgc ctatcttcag 2401 aagaaactgt aggtgctgtt gtatatgccg aagtagggga ttcagcctca atggaacaga 2461 gtcttttaac attcaaatct gaagactctg cagtaaacaa tactcagaat gaagatggca 2521 ttgctttttc agctaatgtt acaccatgtg tttccaagga tggaggatat atacagttga 2581 tgccagccac aagcacagct tttggcaatt caaataacat tctgatagct acctgtgtga 2641 ctgatccaac agcgttagga acatctgtaa gtcagtctaa tgtagtggtg ttgcctggaa 2701 attctgcacc tatgactgct caacctctac cacctcagtt acagacacca ccaaggtcaa 2761 acagtgtatt tgctgtcaac caagctgtgt caccaaactt ttcacaagga tctgccataa 2821 taattgcctc tccagtccag cctgtactcc aaggaatggt agggatgatc ccagtatctg 2881 tggttggaca gaatggaaat aacttttcta ctcctcctcg gcaggttctt catatgcctt 2941 tgacagcacc tgtatgcaat agaagtatcc ctcaattccc cgtccctcca aaatctcaga 3001 aggctcaggg actaagaaaa aagccttgta taggaaaaca agtaaataat ttggtggatt 3061 cgtcaggtca ttcagttgga tgtcatgcac aaaaaactga agtttctgac aaaagtattg 3121 ccacagatct tgggaaaaaa tcagaagaaa ccacagttcc cttcccagaa gagagtatag 3181 ttccagctgc taaaccatgc cacagacgtg tactctgttt cgacagcact actgctcctg 3241 tggcaaatac gcaggggcca aaccataaga tggtgtccca aaacaaagaa aggaatgcag 3301 tctcttttcc taatcttgac tcacccaatg tgtcctccac cttaaaaccc ccttctaata 3361 atgctatcaa aagagagaaa gagaagcctc ctctgcctaa gattttatct aaatcggaaa 3421 gtgccattag ccggcatacc accataagag aaactcaatc agaaaagaaa gtttcaccaa 3481 cagaaattgt gcttgaatct ttccataaag caacagctaa taaggagaat gaattatgca 3541 gcgatgtaga aagacagaaa aatccagaaa attcaaaact atctattggg cagcaaaatg 3601 ggggtttgcg aagtgagaaa tctatagctt cactgcaaga aatgaccaaa aaacaaggca 3661 catcttcaaa caataaaaat gtactttcag taggtacagc tgtgaaggat ctaaaacaag 3721 aacaaactaa atccgccagt tctttgatta ccacagaaat gttacaggat atacagaggc 3781 acagctcagt aagtaggctt gctgatagta gtgatttacc tgtgccccgg acacctggct 3841 caggggcagg ggaaaaacat aaagaagaac ctatagatat tatcaaggcc ccctctagta 3901 ggcgtttcag tgaagacagt agtacatcaa aagtaatggt ccctcctgtc accccagact 3961 tgcctgcctg cagccctgcc agtgaaacag gaagtgaaaa cagtgtaaat atggctgccc 4021 acacattaat gattctctcc agggcagcca tttctaggac tacttcagca actcctctga 4081 aagataacac acaacagttt agagcatctt caaggagcac cacaaaaaag cggaaaattg 4141 aggaattaga tgaacgtgag cgaaactctc gtccttctag taaaaatctt acaaattcat 4201 caataccaat gaaaaagaag aaaattaaga aaaagaagct tcccagttca tttccagcag 4261 gaatggatgt agacaaattt ttgttatcat tgcattatga tgagtaaaca ttctggacac 4321 ataagaacag taggtgttaa aaactcatat cccttaaact gagtgtaggg aatgggatat 4381 tgacagaatc tgaaagcatg acctgcactt tcattgtact gaaacttcac tttatatcta 4441 aatcatgctg tttctgaaac agcttcctag tttgtaaata gacttacttg gtatattttt 4501 attttgggaa aaacgtttgc agaaatgtaa gtaaagccaa tctgcaaaac tgtatagctt 4561 tgacaattcc atattgtaaa tactgtgtaa atcttgttga aatagaggtt aaatcaacct 4621 aatgttctta cactgtgttt tttgacttct tatgatccct aattctgaga cttactcatc 4681 tggaatagtt tctcacttgt tttggaggaa aatgatgctt attcttataa attaccttca 4741 gtaactattc aataagacat ttaaatacac aatcactaag tactacaaaa taataaccac 4801 ctcaactgat agcaaaatat ctaattagaa atcaacagtt tgatgagttt ttttcctaga 4861 gtgaattact acccctttct tataattgct gtaagtatta tatttctgga atttcacact 4921 ttacctactc tgatcactct gttctctttg ttttaaagag agaattttgt aaaccattta 4981 ttgaatgttc tgatctttca tttataactt aagatttttt acagaacttt aagtggttag 5041 actattgagc cataaaattt tggtttgtag tagagatttc tcggtatgta cttttcccct 5101 aaatgctggg ga //