LOCUS BC128243 1124 bp mRNA linear HUM 19-JUN-2008
DEFINITION Homo sapiens family with sequence similarity 170, member A, mRNA
(cDNA clone MGC:149385 IMAGE:40114744), complete cds.
ACCESSION BC128243
VERSION BC128243.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1124)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1124)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-DEC-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 30 Row: i Column: 2.
FEATURES Location/Qualifiers
source 1..1124
/db_xref="H-InvDB:HIT000389769"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:149385 IMAGE:40114744"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GTCATATT sequenced from the reverse primer"
gene 1..1124
/gene="FAM170A"
/gene_synonym="ZNFD"
/db_xref="GeneID:340069"
/db_xref="HGNC:HGNC:27963"
CDS 84..1076
/gene="FAM170A"
/gene_synonym="ZNFD"
/codon_start=1
/product="family with sequence similarity 170, member A"
/protein_id="AAI28244.1"
/db_xref="GeneID:340069"
/db_xref="HGNC:HGNC:27963"
/translation="MKRRQKRKHLENEESQETAEKGGGMSKSQEDALQPGSTRVAKGW
SQGVGEVTSTSEYCSCVSSSRKLIHSGIQRIHRDSPQPQSPLAQVQERGETPPRSQHV
SLSSYSSYKTCVSSLCVNKEERGMKIYYMQVQMNKGVAVSWETEETLESLEKQPRMEE
VTLSEVVRVGTPPSDVSTRNLLSDSEPSGEEKEHEERTESDSLPGSPTVEDTPRAKTP
DWLVTMENGFRCMACCRVFTTMEALQEHVQFGIREGFSCHVFHLTMAQLTGNMESEST
QDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLGLRRSWSQCPGCVFHSPKDRNS"
BASE COUNT 329 a 266 c 320 g 209 t
ORIGIN
1 ctgagagcca agaagggcca atctacagga aaaagtggga ggtggacatt aagcatcttc
61 tagaaactct tctagctgat atcatgaaac gacgacaaaa gaggaaacat ttggaaaatg
121 aagagtccca ggaaaccgct gagaagggag gaggaatgtc aaagtcccaa gaggatgccc
181 tgcagcctgg atccactaga gtggccaaag gctggagcca aggggtggga gaagttactt
241 ctacctccga atactgctcc tgcgtttctt cttcacgcaa gctcatccac agtggaatcc
301 agagaataca tcgagacagc ccccagcctc aatcacccct ggcccaggtt caggaacgag
361 gagagactcc tccccgctca caacatgtct ccttgtcgtc ctattcatcc tataagactt
421 gtgtgtcctc tctgtgtgta aacaaagagg aaaggggcat gaaaatatac tacatgcagg
481 tacaaatgaa caaaggtgtg gctgtctcct gggagacaga ggaaactttg gagtccttag
541 aaaagcagcc aaggatggaa gaagtgaccc tttctgaggt tgtgagggta ggtactcccc
601 cctctgatgt gtccaccaga aacctcctgt ctgacagtga gcccagtggg gaggagaaag
661 agcatgagga aaggacagaa tcagacagcc tgccaggctc acccaccgtt gaggacacac
721 ccagagccaa gactcctgac tggctggtga ccatggagaa cggcttcagg tgcatggcct
781 gctgccgggt gttcaccacc atggaagccc tccaggagca tgtgcagttt gggatcagag
841 agggcttcag ctgccacgtc tttcatctca ccatggctca gctgacaggc aacatggaat
901 cagagagcac ccaagatgag caggaggagg aaaatggaaa tgagaaggag gaggaagaga
961 aaccagaagc aaaggaggag gaggggcagc ccacagaaga agaccttggc ctgaggagat
1021 cctggagcca atgtccaggc tgtgtgtttc attctccaaa ggacaggaac agctgagact
1081 tatgggccag aagatactgg aagatggtgt ggccttctct tgca
//