LOCUS BC127103 4767 bp mRNA linear HUM 07-AUG-2008 DEFINITION Homo sapiens dystrophin, mRNA (cDNA clone IMAGE:40124458), complete cds. ACCESSION BC127103 VERSION BC127103.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4767) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4767) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 29 Row: o Column: 6 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..4767 /db_xref="H-InvDB:HIT000389161" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40124458" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: NA" gene 1..4767 /gene="DMD" /gene_synonym="BMD" /gene_synonym="CMD3B" /gene_synonym="DXS142" /gene_synonym="DXS164" /gene_synonym="DXS206" /gene_synonym="DXS230" /gene_synonym="DXS239" /gene_synonym="DXS268" /gene_synonym="DXS269" /gene_synonym="DXS270" /gene_synonym="DXS272" /db_xref="GeneID:1756" /db_xref="HGNC:HGNC:2928" /db_xref="MIM:300377" CDS 566..4243 /gene="DMD" /gene_synonym="BMD" /gene_synonym="CMD3B" /gene_synonym="DXS142" /gene_synonym="DXS164" /gene_synonym="DXS206" /gene_synonym="DXS230" /gene_synonym="DXS239" /gene_synonym="DXS268" /gene_synonym="DXS269" /gene_synonym="DXS270" /gene_synonym="DXS272" /codon_start=1 /product="DMD protein" /protein_id="AAI27104.2" /db_xref="GeneID:1756" /db_xref="HGNC:HGNC:2928" /db_xref="MIM:300377" /translation="MPSSLMLEVPALADFNRAWTELTDWLSLLDQVIKSQRVMVGDLE DINEMIIKQKATMQDLEQRRPQLEELITAAQNLKNKTSNQEARTIITDRIERIQNQWD EVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARAKLESWKEGPYTVDAIQKKI TETKQLAKDLRQWQTNVDVANDLALKLLRDYSADDTRKVHMITENINASWRSIHKRVS EREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVLQDATRKERLLEDSKGVKELMK QWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLLQRRLDNMNFKWSELRKKSL NIRSHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFK RELKTKEPVIMSTLETVRIFLTEQPLEGLEKLYQEPRELPPEERAQNVTRLLRKQAEE VNTEWEKLNLHSADWQRKIDETLERLQELQEATDELDLKLRQAEVIKGSWQPVGDLLI DSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTTLGIQLSPYNLSTLEDLNTRWKL LQVAVEDRVRQLHEAHRDFGPASQHFLSTSVQGPWERAISPNKVPYYINHETQTTCWD HPKMTELYQSLADLNNVRFSAYRTAMKLRRLQKALCLDLLSLSAACDALDQHNLKQND QPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFK TGIISLCKAHLEDKYRYLFKQVASSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSN IEPSVRSCFQFANNKPEIEAALFLDWMRLEPQSMVWLPVLHRVAAAETAKHQAKCNIC KECPIIGFRYRSLKHFNYDICQSCFFSGRVAKGHKMHYPMVEYCTPTTSGEDVRDFAK VLKNKFRTKRYFAKHPRMGYLPVQTVLEGDNMETPVTLINFWPVDSAPASSPQLSHDD THSRIEHYASRLAEMENSNGSYLNDSISPNESIDDEHLLIQHYCQSLNQDSPLSQPRS PAQILISLESEERGELERILADLEEENRNLQAEYDRLKQQHEHKGLSPLPSPPEMMPT SPQSPRDAELIAEAKLLRQHKGRLEARMQILEDHNKQLESQLHRLRQLLEQPQAEAKV NGTTVSSPSTSLQRSDSSQPMLLRVVGSQTSDSMGEEDLLSPPQDTSTGLEEVMEQLN NSFPSSRGRNTPGKPMREDTM" BASE COUNT 1482 a 1084 c 1116 g 1085 t ORIGIN 1 aactggagga cccgtgcttg taagtgctcc cataagccca gaagagcaag ataaacttga 61 aaataagctc aagcagacaa atctccagtg gataaaggtt tccagagctt tacctgagaa 121 acaaggagaa attgaagctc aaataaaaga ccttgggcag cttgaaaaaa agcttgaaga 181 ccttgaagag cagttaaatc atctgctgct gtggttatct cctattagga atcagttgga 241 aatttataac caaccaaacc aagaaggacc atttgacgtt aaggaaactg aaatagcagt 301 tcaagctaaa caaccggatg tggaagagat tttgtctaaa gggcagcatt tgtacaagga 361 aaaaccagcc actcagccag tgaagaggaa gttagaagat ctgagctctg agtggaaggc 421 ggtaaaccgt ttacttcaag agctgagggc aaagcagcct gacctagctc ctggactgac 481 cactattgga gcctctccta ctcagactgt tactctggtg acacaacctg tggttactaa 541 ggaaactgcc atctccaaac tagaaatgcc atcttccttg atgttggagg tacctgctct 601 ggcagatttc aaccgggctt ggacagaact taccgactgg ctttctctgc ttgatcaagt 661 tataaaatca cagagggtga tggtgggtga ccttgaggat atcaacgaga tgatcatcaa 721 gcagaaggca acaatgcagg atttggaaca gaggcgtccc cagttggaag aactcattac 781 cgctgcccaa aatttgaaaa acaagaccag caatcaagag gctagaacaa tcattacgga 841 tcgaattgaa agaattcaga atcagtggga tgaagtacaa gaacaccttc agaaccggag 901 gcaacagttg aacgaaatgt taaaggattc aacacaatgg ctggaagcta aggaagaagc 961 tgagcaggtc ttaggacagg ccagagccaa gcttgagtca tggaaggagg gtccctatac 1021 agtagatgca atccaaaaga aaatcacaga aaccaagcag ttggccaaag acctccgcca 1081 gtggcagaca aatgtagatg tggcaaatga cttggccctg aaacttctcc gggattattc 1141 tgcagatgat accagaaaag tccacatgat aacagagaat atcaatgcct cttggagaag 1201 cattcataaa agggtgagtg agcgagaggc tgctttggaa gaaactcata gattactgca 1261 acagttcccc ctggacctgg aaaagtttct tgcctggctt acagaagctg aaacaactgc 1321 caatgtccta caggatgcta cccgtaagga aaggctccta gaagactcca agggagtaaa 1381 agagctgatg aaacaatggc aagacctcca aggtgaaatt gaagctcaca cagatgttta 1441 tcacaacctg gatgaaaaca gccaaaaaat cctgagatcc ctggaaggtt ccgatgatgc 1501 agtcctgtta caaagacgtt tggataacat gaacttcaag tggagtgaac ttcggaaaaa 1561 gtctctcaac attaggtccc atttggaagc cagttctgac cagtggaagc gtctgcacct 1621 ttctctgcag gaacttctgg tgtggctaca gctgaaagat gatgaattaa gccggcaggc 1681 acctattgga ggcgactttc cagcagttca gaagcagaac gatgtacata gggccttcaa 1741 gagggaattg aaaactaaag aacctgtaat catgagtact cttgagactg tacgaatatt 1801 tctgacagag cagcctttgg aaggactaga gaaactctac caggagccca gagagctgcc 1861 tcctgaggag agagcccaga atgtcactcg gcttctacga aagcaggctg aggaggtcaa 1921 tactgagtgg gaaaaattga acctgcactc cgctgactgg cagagaaaaa tagatgagac 1981 ccttgaaaga ctccaggaac ttcaagaggc cacggatgag ctggacctca agctgcgcca 2041 agctgaggtg atcaagggat cctggcagcc cgtgggcgat ctcctcattg actctctcca 2101 agatcacctc gagaaagtca aggcacttcg aggagaaatt gcgcctctga aagagaacgt 2161 gagccacgtc aatgaccttg ctcgccagct taccactttg ggcattcagc tctcaccgta 2221 taacctcagc actctggaag acctgaacac cagatggaag cttctgcagg tggccgtcga 2281 ggaccgagtc aggcagctgc atgaagccca cagggacttt ggtccagcat ctcagcactt 2341 tctttccacg tctgtccagg gtccctggga gagagccatc tcgccaaaca aagtgcccta 2401 ctatatcaac cacgagactc aaacaacttg ctgggaccat cccaaaatga cagagctcta 2461 ccagtcttta gctgacctga ataatgtcag attctcagct tataggactg ccatgaaact 2521 ccgaagactg cagaaggccc tttgcttgga tctcttgagc ctgtcagctg catgtgatgc 2581 cttggaccag cacaacctca agcaaaatga ccagcccatg gatatcctgc agattattaa 2641 ttgtttgacc actatttatg accgcctgga gcaagagcac aacaatttgg tcaacgtccc 2701 tctctgcgtg gatatgtgtc tgaactggct gctgaatgtt tatgatacgg gacgaacagg 2761 gaggatccgt gtcctgtctt ttaaaactgg catcatttcc ctgtgtaaag cacatttgga 2821 agacaagtac agataccttt tcaagcaagt ggcaagttca acaggatttt gtgaccagcg 2881 caggctgggc ctccttctgc atgattctat ccaaattcca agacagttgg gtgaagttgc 2941 atcctttggg ggcagtaaca ttgagccaag tgtccggagc tgcttccaat ttgctaataa 3001 taagccagag atcgaagcgg ccctcttcct agactggatg agactggaac cccagtccat 3061 ggtgtggctg cccgtcctgc acagagtggc tgctgcagaa actgccaagc atcaggccaa 3121 atgtaacatc tgcaaagagt gtccaatcat tggattcagg tacaggagtc taaagcactt 3181 taattatgac atctgccaaa gctgcttttt ttctggtcga gttgcaaaag gccataaaat 3241 gcactatccc atggtggaat attgcactcc gactacatca ggagaagatg ttcgagactt 3301 tgccaaggta ctaaaaaaca aatttcgaac caaaaggtat tttgcgaagc atccccgaat 3361 gggctacctg ccagtgcaga ctgtcttaga gggggacaac atggaaactc ccgttactct 3421 gatcaacttc tggccagtag attctgcgcc tgcctcgtcc cctcagcttt cacacgatga 3481 tactcattca cgcattgaac attatgctag caggctagca gaaatggaaa acagcaatgg 3541 atcttatcta aatgatagca tctctcctaa tgagagcata gatgatgaac atttgttaat 3601 ccagcattac tgccaaagtt tgaaccagga ctcccccctg agccagcctc gtagtcctgc 3661 ccagatcttg atttccttag agagtgagga aagaggggag ctagagagaa tcctagcaga 3721 tcttgaggaa gaaaacagga atctgcaagc agaatatgac cgtctaaagc agcagcacga 3781 acataaaggc ctgtccccac tgccgtcccc tcctgaaatg atgcccacct ctccccagag 3841 tccccgggat gctgagctca ttgctgaggc caagctactg cgtcaacaca aaggccgcct 3901 ggaagccagg atgcaaatcc tggaagacca caataaacag ctggagtcac agttacacag 3961 gctaaggcag ctgctggagc aaccccaggc agaggccaaa gtgaatggca caacggtgtc 4021 ctctccttct acctctctac agaggtccga cagcagtcag cctatgctgc tccgagtggt 4081 tggcagtcaa acttcggact ccatgggtga ggaagatctt ctcagtcctc cccaggacac 4141 aagcacaggg ttagaggagg tgatggagca actcaacaac tccttcccta gttcaagagg 4201 aagaaatacc cctggaaagc caatgagaga ggacacaatg taggaagtct tttccacatg 4261 gcagatgatt tgggcagagc gatggagtcc ttagtatcag tcatgacaga tgaagaagga 4321 gcagaataaa tgttttacaa ctcctgattc ccgcatggtt tttataatat tcatacaaca 4381 aagaggatta gacagtaaga gtttacaaga aataaatcta tatttttgtg aagggtagtg 4441 gtattatact gtagatttca gtagtttcta agtctgttat tgttttgtta acaatggcag 4501 gttttacacg tctatgcaat tgtacaaaaa agttataaga aaactacatg taaaatcttg 4561 atagctaaat aacttgccat ttctttatat ggaacgcatt ttgggttgtt taaaaattta 4621 taacagttat aaagaaagat tgtaaactaa agtgtgcttt ataaaaaaaa gttgtttata 4681 aaaaccccta aaaacaaaac aaacacacac acacacacat acacacacac acacaaaact 4741 ttgaggcagc gcattgtttt gcatcaa //