LOCUS BC126110 3689 bp mRNA linear HUM 23-OCT-2006 DEFINITION Homo sapiens TSR1, 20S rRNA accumulation, homolog (S. cerevisiae), mRNA (cDNA clone MGC:161388 IMAGE:8991826), complete cds. ACCESSION BC126110 VERSION BC126110.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3689) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3689) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 7 Row: A Column: 8. FEATURES Location/Qualifiers source 1..3689 /db_xref="H-InvDB:HIT000388702" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:161388 IMAGE:8991826" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CTATAATC" gene 1..3689 /gene="TSR1" /gene_synonym="FLJ10534" /gene_synonym="KIAA1401" /db_xref="GeneID:55720" /db_xref="HGNC:HGNC:25542" CDS 506..2920 /gene="TSR1" /gene_synonym="FLJ10534" /gene_synonym="KIAA1401" /codon_start=1 /product="TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)" /protein_id="AAI26111.1" /db_xref="GeneID:55720" /db_xref="HGNC:HGNC:25542" /translation="MAAHRPGPLKQQNKAHKGGRHRGRGSAQRDGKGRLALKTLSKKV RKELSRVDQRHRASQLRKQKKEAVLAEKRQLGGKDGPPHQVLVVPLHSRISLPEAMQL LQDRDTGTVHLNELGNTQNFMLLCPRLKHRWFFTSARPGDLHVVLDMAKVADTILFLL DPLEGWDSTGDYCLSCLFAQGLPTYTLAVQGISGLPLKKQIDTRKKLSKAVEKRFPHD KLLLLDTQQEAGMLLRQLANQKQQHLAFRDRRAYLFAHAVDFVPSEENNLVGTLKISG YVRGQTLNVNRLLHIVGYGDFQMKQIDAPGDPFPLNPRGIKPQKDPDMAMEICATDAV DDMEEGLKVLMKADPGRQESLQAEVIPDPMEGEQTWPTEEELSEAKDFLKESSKVVKK VPKGTSSYQAEWILDGGSQSGGEGDEYEYDDMEHEDFMEEESQDESSEEEEEYETMTI GESVHDDLYDKKVDEEAEAKMLEKYKQERLEEMFPDEVDTPRDVAARIRFQKYRGLKS FRTSPWDPKENLPQDYARIFQFQNFTNTRKSIFKEVEEKEVEGAEVGWYVTLHVSEVP VSVVECFRQGTPLIAFSLLPHEQKMSVLNMVVRRDPGNTEPVKAKEELIFHCGFRRFR ASPLFSQHTAADKHKLQRFLTADMALVATVYAPITFPPASVLLFKQKSNGMHSLIATG HLMSVDPDRMVIKRVVLSGHPFKIFTKMAVVRYMFFNREDVLWFKPVELRTKWGRRGH IKEPLGTHGHMKCSFDGKLKSQDTVLMNLYKRVFPKWTYDPYVPEPVPWLKSEISSTV PQGGME" BASE COUNT 1055 a 825 c 939 g 870 t ORIGIN 1 accgggcaag gtgagagaag tgtcttccac gcgattccca agcctcgcta gggaatcgag 61 ggagaagaaa ggttgctcag agtgataaag aacatgccgt tgcaaacgga agagcaacgt 121 gcccgaatct aggtgacagg aagggcttag gccttttcgg cacgaatgga gccttccagt 181 caacatgctt ctacgtgatg cagctttata gcgcaaaaaa atgacaatgc aaggggtaca 241 aacagccctg ctagaccaac agcccgagcc tcgacagtct acatccggcg ccttcaagcc 301 cccaaccaca cactgcgaag tgggaaaagt tcccagcgcg gcttggcgaa cccgctaaca 361 cggcgctctc acgagctgct ggaaaagacc ttcgcgagag ggcgcaggga gtcccgctcc 421 ctggagggcc cgcccccttg gaggggaccg gaagcgcttg tcctggcccg gaagcagtgc 481 tgactccgta cacgcgcgct gcggcatggc ggcccaccgc cccggcccgc tcaagcagca 541 gaataaagct cataaaggcg gacggcatcg gggtcgggga tctgcacagc gggacggcaa 601 gggccgtctg gcactgaaaa ccctaagcaa gaaggtgaga aaagaactca gcagagtcga 661 ccagaggcat cgcgccagcc agctccgaaa gcagaagaag gaggcggttc tggcagagaa 721 gagacagctg ggtggcaagg atggccctcc tcatcaggta ctggtggtgc ccctgcacag 781 cagaatttcc ctgccagagg ccatgcagct gcttcaagat agggacactg gaacagtaca 841 cttgaatgaa ttgggaaaca cccagaactt tatgctgctg tgcccccgct tgaaacatcg 901 gtggtttttc acctcagcaa ggccagggga tctgcacgtt gtgttagaca tggctaaagt 961 agctgatacc atcctgttcc tccttgatcc actagaaggc tgggacagca ccggtgatta 1021 ctgtctttcc tgcctctttg ctcagggcct tccgacctat acactagctg tccaggggat 1081 ttctggcctc ccactgaaga aacaaataga taccaggaag aagctaagta aagcagtgga 1141 gaagcgcttt ccgcatgaca aactcctctt gttagacact caacaggagg cagggatgct 1201 gcttaggcag ttggctaacc agaagcaaca gcatcttgct tttcgagatc ggcgggccta 1261 cctatttgcc catgctgttg attttgttcc tagtgaagag aataacttgg tgggcacctt 1321 gaaaatttca ggctatgttc gagggcagac tctgaatgtc aataggttgc tgcatatcgt 1381 tggatatggt gatttccaga tgaaacagat agatgccccc ggagaccctt tccctttaaa 1441 tcctagagga attaaacccc aaaaggaccc agacatggca atggagattt gtgctacgga 1501 tgctgtagat gatatggaag aaggtcttaa agtcctaatg aaggcagacc ctggtagaca 1561 ggaatccttg caagcagagg ttatcccaga tccaatggag ggagagcaaa cctggcccac 1621 tgaggaggag ctgagcgagg caaaggattt cttgaaggaa agttctaagg tggtaaagaa 1681 ggtccccaaa ggaacatcca gttaccaagc tgaatggatt ttggatggtg gcagccaaag 1741 tggtggggaa ggagatgaat atgaatatga tgatatggaa catgaggatt ttatggagga 1801 ggaatctcag gatgagagta gtgaagaaga ggaagaatat gaaactatga ctattgggga 1861 gtctgtgcat gatgatctgt atgataagaa agtagatgaa gaagctgagg caaaaatgtt 1921 ggaaaaatat aaacaagaaa gactggaaga gatgtttcca gatgaagtgg acacgccccg 1981 tgatgtggct gctcgaattc gatttcagaa atacagaggc cttaagagct tccggacatc 2041 tccatgggat cctaaggaaa accttcctca agattatgct cgaatatttc agtttcagaa 2101 ctttactaac actaggaaaa gcatctttaa agaggttgaa gaaaaagagg ttgaaggagc 2161 tgaggttggc tggtatgtca cacttcatgt ctctgaagtc cccgtctcag tggtcgagtg 2221 cttcaggcaa ggaacaccct tgattgcatt ttctttacta cctcatgaac agaagatgtc 2281 agtattgaat atggtggtga ggcgtgaccc tggcaacact gaacctgtga aagccaagga 2341 agagctcata tttcactgtg gattcaggcg cttccgagcc tcacctttat tctctcagca 2401 cactgcagcg gacaaacata aattgcagag attcctgact gctgacatgg ccctggtggc 2461 gacagtctat gcgccaatca cttttcctcc tgcatctgtg ctgcttttca agcaaaaaag 2521 caatggaatg cacagcctca ttgctacagg ccatcttatg tcagtagatc cagacagaat 2581 ggtcatcaag agagttgttc tgagtggtca tcctttcaaa atttttacta agatggcagt 2641 agtacgttac atgttcttca acagagagga tgtgctgtgg tttaaaccag tggaactgag 2701 aacgaagtgg ggccggagag gacatatcaa ggaaccttta ggtacccatg gccacatgaa 2761 atgcagcttt gatgggaagc taaaatctca agacacagta ctgatgaacc tgtataaacg 2821 agtcttcccc aaatggactt atgatccata tgtaccagaa ccagtaccct ggctgaaaag 2881 tgagatttct tcaacagtgc ctcaaggggg catggagtaa tggattcaaa gagattctgt 2941 cttaccggtg ccagtcagta ctccagggat gggaggcaca agttgtgatt gggcaaagtt 3001 tattttctat gtcagcctgt cagtccactg ccccattttg caagactttt tttttagcct 3061 tgacaaaatg tctcagttaa gtataaaagt ttttccacta cttagtccaa aaaaaaacta 3121 ttaaatctta atgaaatagc cactctccat taagaatctg ataactaaga gttgacaata 3181 ctaggaaaca aaatgtcttc agtatctaaa gacactgaat tcccaccatt tccttttctg 3241 taaattaaac agaaacagac tgataagaag ctggcctttc agcctgcttc acccaagtta 3301 tggaggaggt taagtctaca tttccaccac tgagcacaat acaaatgttc tttacttctg 3361 gggaaacagt ttgaaaatgt tgagacagca cagcagccac tccaacacca gctgtaggtt 3421 caatgagtag tttcatcctc tcccacacca gctgggttgc acactgttga tatggaaggg 3481 agtaggaatt agtgaaaggg gagtctagtt ggtttaccta taaagttcag atgagaatac 3541 gtgtccagtt tgaatttttt tatcactgtg tacacacgct tcccaaagct tttctttaat 3601 tctgactctg cttctgtcaa gagggttgtc attaatacat ctagggtacc ctcccatgtc 3661 atgaagttac ctagtcaggt tcccgtggg //