LOCUS BC117400 798 bp mRNA linear HUM 16-FEB-2007
DEFINITION Homo sapiens TGFB-induced factor homeobox 2-like, X-linked, mRNA
(cDNA clone MGC:151009 IMAGE:40125951), complete cds.
ACCESSION BC117400
VERSION BC117400.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 798)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 798)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-MAY-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 6 Row: L Column: 24.
FEATURES Location/Qualifiers
source 1..798
/db_xref="H-InvDB:HIT000387690"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:151009 IMAGE:40125951"
/tissue_type="Testis, PCR rescued clones"
/clone_lib="NIH_MGC_373"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CACCACTG"
gene 1..798
/gene="TGIF2LX"
/gene_synonym="TGIFLX"
/db_xref="GeneID:90316"
/db_xref="HGNC:HGNC:18570"
/db_xref="MIM:300411"
CDS 50..775
/gene="TGIF2LX"
/gene_synonym="TGIFLX"
/codon_start=1
/product="TGFB-induced factor homeobox 2-like, X-linked"
/protein_id="AAI17401.1"
/db_xref="GeneID:90316"
/db_xref="HGNC:HGNC:18570"
/db_xref="MIM:300411"
/translation="MEAAADGPAETQSPVEKDSPAKTQSPAQDTSIMSRNNADTGRVL
ALPEHKKKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFI
NARRRILPDMLQQRRNDPIIGHKTGKDAHATHLQSTEASVPAKSGPSGPDNVQSLPLW
PLPKGQMSREKQPDPESAPSQKLTGIAQPKKKVKVSITSPSSPELVSPEEHADFSSFL
LLVDAAVQRAAELELEKKQEPNP"
BASE COUNT 230 a 224 c 200 g 144 t
ORIGIN
1 cgctgtttgt ctttctcgga aacaacagta acgataagcc tcttggaata tggaggccgc
61 tgcggacggc ccggctgaga cccaaagccc ggtggaaaaa gacagcccgg cgaagaccca
121 aagcccagcc caagacacct caatcatgtc gagaaataac gcagatacag gcagagttct
181 tgccttacca gagcacaaga agaagcgcaa gggaaacttg ccagccgagt ccgttaagat
241 cctccgcgac tggatgtata agcatcggtt taaggcctac ccttcagaag aagagaagca
301 aatgctgtca gagaagacca atttgtcttt gttgcagatt tctaactggt ttatcaatgc
361 tcgcagacgc attctcccgg atatgcttca acagcgtaga aacgacccca tcattggcca
421 caaaacgggc aaagatgccc atgccaccca cctgcagagc accgaggcgt ctgtgccggc
481 caagtcaggg cccagtggtc cagacaatgt acaaagcctg cccctgtggc ccttgccaaa
541 gggccagatg tcaagagaga agcaaccaga tccggagtcg gcccctagcc agaagctcac
601 cggaatagcc cagccgaaga aaaaggtcaa ggtttctatc acatccccgt cttctccaga
661 acttgtgtct ccagaggagc acgccgactt cagcagcttc ctgctgctag tcgatgcagc
721 agtacaaagg gctgccgagc tggagctaga gaagaagcaa gagcctaatc catgattgat
781 gatgttccaa aaacccaa
//