LOCUS BC112125 1306 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens growth hormone regulated TBC protein 1, mRNA (cDNA
clone MGC:138330 IMAGE:8327593), complete cds.
ACCESSION BC112125
VERSION BC112125.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1306)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1306)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 4 Row: h Column: 23.
FEATURES Location/Qualifiers
source 1..1306
/db_xref="H-InvDB:HIT000340254"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138330 IMAGE:8327593"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TGTAAGAG"
gene 1..1306
/gene="GRTP1"
/gene_synonym="FLJ22474"
/gene_synonym="TBC1D6"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
CDS 48..821
/gene="GRTP1"
/gene_synonym="FLJ22474"
/gene_synonym="TBC1D6"
/codon_start=1
/product="GRTP1 protein"
/protein_id="AAI12126.1"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
/translation="MDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFPDNVKFRKTTDP
CLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDY
YSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETV
LRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTF
MQVCGAARGSVPSQGAPPHLQPGGCSDHPEGAQDGHQWA"
BASE COUNT 254 a 352 c 418 g 282 t
ORIGIN
1 gaattcgccc ttgcgtctgg atggtgctga gtggggccca ggcgcagatg gaccagaatc
61 ccggctacta ccaccagctt ctccagggag agagaaaccc caggctggag gacgccatca
121 ggacagacct gaaccggacc ttccccgaca acgtgaagtt ccggaagacc acggacccct
181 gcttacagag gaccctgtac aatgtgctgc tggcatatgg gcaccataac cagggagtgg
241 gctactgcca gggaatgaat tttatagcag gatatctgat tcttataaca aataatgaag
301 aagaatcttt ttggctgtta gatgctcttg ttggaagaat actaccagat tactacagcc
361 cggccatgct gggcctgaag accgaccagg aggtcctcgg ggagctggtg cgggcgaagc
421 tgccggctgt gggggccctg atggagcgtc tcggtgtgct gtggacgctg ctggtgtccc
481 gctggttcat ctgcctgttt gtggacatct tgcccgtgga gacagtgctt cggatctggg
541 actgtttgtt taacgaaggc tcgaagatta tcttccgggt ggccctgacc ttaattaagc
601 agcaccagga gttgattttg gaagccacca gcgttccaga catttgcgat aagtttaagc
661 agataaccaa agggagtttc gtgatggagt gtcacacgtt tatgcaggtg tgtggggctg
721 cacgtggctc agtcccctcc cagggggccc cgcctcacct gcagcccggg ggctgctctg
781 accacccgga gggtgcacag gacgggcacc agtgggcata gggcacagga tgagcctcca
841 gctctgtcct gcatctgccc cctgcgcctg gcctccgagg gctttcctgt ctatggcggc
901 cctgtcttct tggccctggc actgcggacg ctgctcctgg tcctaatggc tgtactcatc
961 tgctgtgtgt ggtgccagaa gtgtggcttc ccgaggcccg gcctccccac tgggtcctgg
1021 acctggcgca ggccgtatag actcaggtcc tgatgagggc gttgtgggag ctgtacctga
1081 caggccttct gaggaagcca agacgccagg agaggctcag gcctgggagt cagtagtttc
1141 ctaagaggga gtggaggctc ggggccactc tgggtgcagc atggcaaacg tgggcggtat
1201 ttcagcagct gggccttcat caaagagaag accatgttgg ccgggcgcgg tggctcacgc
1261 ctgcagtccc agcactttgg gaggccaagg cgtgtggatc acctga
//