LOCUS BC112123 1294 bp mRNA linear HUM 08-DEC-2006
DEFINITION Homo sapiens growth hormone regulated TBC protein 1, mRNA (cDNA
clone MGC:138328 IMAGE:8327591), complete cds.
ACCESSION BC112123
VERSION BC112123.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1294)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1294)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-JAN-2006) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 4 Row: h Column: 21.
FEATURES Location/Qualifiers
source 1..1294
/db_xref="H-InvDB:HIT000340252"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:138328 IMAGE:8327591"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AATCGCCC"
gene 1..1294
/gene="GRTP1"
/gene_synonym="FLJ22474"
/gene_synonym="TBC1D6"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
CDS 36..809
/gene="GRTP1"
/gene_synonym="FLJ22474"
/gene_synonym="TBC1D6"
/codon_start=1
/product="GRTP1 protein"
/protein_id="AAI12124.1"
/db_xref="GeneID:79774"
/db_xref="HGNC:HGNC:20310"
/translation="MDQNPGYYHQLLQGERNPRLEDAIRTDLNRTFPDNVKFRKTTDP
CLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNNEEESFWLLDALVGRILPDY
YSPAMLGLKTDQEVLGELVRAKLPAVGALMERLGVLWTLLVSRWFICLFVDILPVETV
LRIWDCLFNEGSKIIFRVALTLIKQHQELILEATSVPDICDKFKQITKGSFVMECHTF
MQVCGAARGSVPSQGAPPHLQPGGCSDHPEGAQDGHQWA"
BASE COUNT 252 a 348 c 416 g 278 t
ORIGIN
1 gcgtctggat ggtgctgagt ggggcccagg cgcagatgga ccagaatccc ggctactacc
61 accagcttct ccagggagag agaaacccca ggctggagga cgccatcagg acagacctga
121 accggacctt ccccgacaac gtgaagttcc ggaagaccac ggacccctgc ttacagagga
181 ccctgtacaa tgtgctgctg gcatatgggc accataacca gggagtgggc tactgccagg
241 gaatgaattt tatagcagga tatctgattc ttataacaaa taatgaagaa gaatcttttt
301 ggctgttaga tgctcttgtt ggaagaatac taccagatta ctacagcccg gccatgctgg
361 gcctgaagac cgaccaggag gtcctcgggg agctggtgcg ggcgaagctg ccggctgtgg
421 gggccctgat ggagcgtctc ggtgtgctgt ggacgctgct ggtgtcccgc tggttcatct
481 gcctgtttgt ggacatcttg cccgtggaga cagtgcttcg gatctgggac tgtttgttta
541 acgaaggctc gaagattatc ttccgggtgg ccctgacctt aattaagcag caccaggagt
601 tgattttgga agccaccagc gttccagaca tttgcgataa gtttaagcag ataaccaaag
661 ggagtttcgt gatggagtgt cacacgttta tgcaggtgtg tggggctgca cgtggctcag
721 tcccctccca gggggccccg cctcacctgc agcccggggg ctgctctgac cacccggagg
781 gtgcacagga cgggcaccag tgggcatagg gcacaggatg agcctccagc tctgtcctgc
841 atctgccccc tgcgcctggc ctccgagggc tttcctgtct atggcggccc tgtcttcttg
901 gccctggcac tgcggacgct gctcctggtc ctaatggctg tactcatctg ctgtgtgtgg
961 tgccagaagt gtggcttccc gaggcccggc ctccccactg ggtcctggac ctggcgcagg
1021 ccgtatagac tcaggtcctg atgagggcgt tgtgggagct gtacctgaca ggccttctga
1081 ggaagccaag acgccaggag aggctcaggc ctgggagtca gtagtttcct aagagggagt
1141 ggaggctcgg ggccactctg ggtgcagcat ggcaaacgtg ggcggtattt cagcagctgg
1201 gccttcatca aagagaagac catgttggcc gggcgcggtg gctcacgcct gcagtcccag
1261 cactttggga ggccaaggcg tgtggatcac ctga
//