LOCUS BC111007 1337 bp mRNA linear HUM 11-APR-2007 DEFINITION Homo sapiens caprin family member 2, mRNA (cDNA clone IMAGE:5770001), complete cds. ACCESSION BC111007 VERSION BC111007.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1337) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1337) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-DEC-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 233 Row: p Column: 7 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1337 /db_xref="H-InvDB:HIT000339830" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5770001" /tissue_type="Brain, fetal, whole pooled" /clone_lib="NIH_MGC_121" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1337 /gene="CAPRIN2" /gene_synonym="caprin-2" /gene_synonym="EEG-1" /gene_synonym="EEG1" /db_xref="GeneID:65981" /db_xref="HGNC:HGNC:21259" /db_xref="MIM:610375" CDS 463..939 /gene="CAPRIN2" /gene_synonym="caprin-2" /gene_synonym="EEG-1" /gene_synonym="EEG1" /codon_start=1 /product="CAPRIN2 protein" /protein_id="AAI11008.1" /db_xref="GeneID:65981" /db_xref="HGNC:HGNC:21259" /db_xref="MIM:610375" /translation="MTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTL DQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVL VSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD" BASE COUNT 408 a 271 c 284 g 374 t ORIGIN 1 tattcaagta agcaatggta gccttgcctt ttacccagca cagacgaatg tatttcccag 61 acctactcag ccatttgtca atagccgggg atctgttaga ggatgtactc gtggtgggag 121 attaataacc aattcctatc ggtcccctgg tggttataaa ggttttgata cttatagagg 181 actcccttca atttccaatg gaaattatag ccagctgcag ttccaagcta gagagtattc 241 tggagcacct tattcccaaa gggataattt ccagcagtgt tataagcgag gagggacatc 301 tggtggtcca cgagcaaatt cgagagctaa ctgcttcatt atgagaaact cactgttgct 361 aataaaacag cagggtggag tgattcttct caggtgagca gcccagaaag agacaacgaa 421 acctttaaca gtggtgactc tggacaagga gactcccgta gcatgacccc tgtggatgtg 481 ccagtgacaa atccagcagc caccatactg ccagtacacg tctaccctct gcctcagcag 541 atgcgagttg ccttctcagc agccagaacc tctaatctgg cccctggaac tttagaccaa 601 cctattgtgt ttgatcttct tctgaacaac ttaggagaaa cttttgatct tcagcttggt 661 agatttaatt gcccagtgaa tggcacttac gttttcattt ttcacatgct aaagctggca 721 gtgaatgtgc cactgtatgt caacctcatg aagaatgaag aggtcttggt atcagcctat 781 gccaatgatg gtgctccaga ccatgaaact gctagcaatc atgcaattct tcagctcttc 841 cagggagacc agatatggtt acgtctgcac aggggagcaa tttatggaag tagctggaaa 901 tattctacgt tttcaggcta tcttctttat caagattgaa agtcagtaca gtattgacaa 961 taaaaggatg gtgttctaat tagtgggatt gaaggaaaag tagtctttgc cctcatgact 1021 gattggttta ggaaaatgtt tttgttccta gagggaggag gtccttactt ttttgttttc 1081 cttcctgagg tgaaaaatca agctgaatga caattagcac taatctggca ctttataaat 1141 tgtgatgtag cctcgctagt caagctgtga atgtatattg tttgcactta atccttaact 1201 gtattaacgt tcagcttact aaactgactg cctcaagtcc aggcaagtta caatgccttg 1261 ttgtgcctca ataaaaaagt tacatgcaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1321 aaaaaaaaaa aaaaaaa //