LOCUS BC103815 1265 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens collectin sub-family member 10 (C-type lectin), mRNA (cDNA clone MGC:118794 IMAGE:40000432), complete cds. ACCESSION BC103815 VERSION BC103815.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1265) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1265) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 8 Row: a Column: 19. FEATURES Location/Qualifiers source 1..1265 /db_xref="H-InvDB:HIT000337367" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:118794 IMAGE:40000432" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: CTCCTAA sequenced from the reverse primer" gene 1..1265 /gene="COLEC10" /gene_synonym="CLL1" /db_xref="GeneID:10584" /db_xref="HGNC:HGNC:2220" /db_xref="MIM:607620" CDS 42..875 /gene="COLEC10" /gene_synonym="CLL1" /codon_start=1 /product="collectin sub-family member 10 (C-type lectin)" /protein_id="AAI03816.1" /db_xref="GeneID:10584" /db_xref="HGNC:HGNC:2220" /db_xref="MIM:607620" /translation="MNGFASLLRRNQFILLVLFLLQIQSLGLDIDSRPTAEVCATHTI SPGPKGDDGEKGDPGEEGKHGKVGRMGPKGIKGELGDMGDQGNIGKTGPIGKKGDKGE KGLLGIPGEKGKAGTVCDCGRYRKFVGQLDISIARLKTSMKFVKNVIAGIRETEEKFY YIVQEEKNYRESLTHCRIRGGMLAMPKDEAANTLIADYVAKSGFFRVFIGVNDLEREG QYMFTDNTPLQNYSNWNEGEPSDPYGHEDCVEMLSSGRWNDTECHLTMYFVCEFIKKK K" BASE COUNT 357 a 242 c 319 g 347 t ORIGIN 1 tttggcattt ctgggagacc cttttctgag gaaccacagc aatgaatggc tttgcatcct 61 tgcttcgaag aaaccaattt atcctcctgg tactatttct tttgcaaatt cagagtctgg 121 gtctggatat tgatagccgt cctaccgctg aagtctgtgc cacacacaca atttcaccag 181 gacccaaagg agatgatggt gaaaaaggag atccaggaga agagggaaag catggcaaag 241 tgggacgcat ggggccgaaa ggaattaaag gagaactggg tgatatggga gatcagggca 301 atattggcaa gactgggccc attgggaaga agggtgacaa aggggaaaaa ggtttgcttg 361 gaatacctgg agaaaaaggc aaagcaggta ctgtctgtga ttgtggaaga taccggaaat 421 ttgttggaca actggatatt agtattgctc ggctcaagac atctatgaag tttgtcaaga 481 atgtgatagc agggattagg gaaactgaag agaaattcta ctacatcgtg caggaagaga 541 agaactacag ggaatcccta acccactgca ggattcgggg tggaatgcta gccatgccca 601 aggatgaagc tgccaacaca ctcatcgctg actatgttgc caagagtggc ttctttcggg 661 tgttcattgg cgtgaatgac cttgaaaggg agggacagta catgttcaca gacaacactc 721 cactgcagaa ctatagcaac tggaatgagg gggaacccag cgacccctat ggtcatgagg 781 actgtgtgga gatgctgagc tctggcagat ggaatgacac agagtgccat cttaccatgt 841 actttgtctg tgagttcatc aagaagaaaa agtaacttcc ctcatcctac gtattgctat 901 tttcctgtga ccgtcattac agttattgtt atccatcctt tttttcctga ttgtactaca 961 tttgatctga gtcaacatag ctagaaaatg ctaaactgag gtatggagcc tccatcatca 1021 tgctcttttg tgatgatttt catattttca cacatggtat attattgacc caataactcg 1081 ccaggttaca tgggtcttga gagagaattt taattactaa ttgtgcacga gatagttggt 1141 tgtctatatg tcaaatgagt tgttctcttg gtatttgctc taccatctct ccctagagca 1201 ctctgtgtct atcccagtgg ataatttccc agtttactgg tgatgattag gaaggttgtt 1261 gatgg //