LOCUS BC100978 1341 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens rhomboid, veinlet-like 3 (Drosophila), mRNA (cDNA
clone MGC:119301 IMAGE:40005247), complete cds.
ACCESSION BC100978
VERSION BC100978.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1341)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1341)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 5 Row: h Column: 6.
FEATURES Location/Qualifiers
source 1..1341
/db_xref="H-InvDB:HIT000336390"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119301 IMAGE:40005247"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: NA"
gene 1..1341
/gene="RHBDL3"
/gene_synonym="VRHO"
/db_xref="GeneID:162494"
/db_xref="HGNC:HGNC:16502"
CDS 288..1208
/gene="RHBDL3"
/gene_synonym="VRHO"
/codon_start=1
/product="RHBDL3 protein"
/protein_id="AAI00979.1"
/db_xref="GeneID:162494"
/db_xref="HGNC:HGNC:16502"
/translation="MSNKRSNSFRQAILQGNRRLSSKALLEEKGLSLSQRLIRHVAYE
TLPREIDRKWYYDSYTCCPPPWFMITVTLLEVAFFLYNGVSLGQFVLQVTHPRYLKNS
LVYHPQLRAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYVAGV
VAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVALICMS
MEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVAVGITLGVVVLRNYEQRLQDQSLWWIF
VAMYTVFVLFAVFWNIFAYTLLDLKLPPPP"
BASE COUNT 240 a 403 c 403 g 295 t
ORIGIN
1 accccgtctc ggccatgggc gagcacccca gcccgggccc cgcggtggcc gcctgcgccg
61 aggcggagcg catcgaggag ctggaacccg aggccgagga gcggctgccc gcggcgccgg
121 aggaccactg gaaagtcctg tttgatcagg aagccttcct tgacctctga cctccctggg
181 actggattgg gctccctctt gtgtgctccc acagcaacca tcactctgaa ctgtgattgc
241 tggttactaa tctgtcttga gcaccaccgt atccctccct gtgcctgatg agcaacaagc
301 gttccaacag cttccgccaa gccatcctgc agggcaaccg caggctaagc agcaaggccc
361 tgctggagga gaaggggctg agcctctcgc agcgacttat ccgccatgtg gcctatgaga
421 ccctgccccg ggaaattgac cgcaagtggt actatgacag ctacacctgc tgccccccac
481 cctggttcat gatcacagtc acgctgctgg aggttgcctt tttcctctac aatggggtgt
541 cactaggtca atttgtactg caggtaactc atccacgtta cttgaagaac tccctggttt
601 accacccaca gctgcgagca caggtttggc gctacctgac atacatcttc atgcatgcag
661 ggatagaaca cctgggactc aatgtggtgc tgcagctgct ggtgggggtg cccctggaga
721 tggtgcatgg agccacccga attgggcttg tctacgtggc cggtgttgtg gcagggtcct
781 tggcagtgtc tgtggctgac atgaccgctc cagtcgtggg ctcttctgga ggggtgtatg
841 ctctcgtctc tgcccatctg gccaacattg tcatgaactg gtcaggcatg aagtgccagt
901 tcaagctgct gcggatggct gtggccctta tctgtatgag catggagttt gggcgggccg
961 tgtggctccg cttccacccg tcggcctatc ccccgtgccc tcacccaagc tttgtggcgc
1021 acttgggtgg cgtggccgtg ggcatcaccc tgggcgtggt ggtcctgagg aactacgagc
1081 agaggctcca ggaccagtca ctgtggtgga tttttgtggc catgtacacc gtcttcgtgc
1141 tgttcgctgt cttctggaac atctttgcct acaccctgct ggacttaaag ctgccgcctc
1201 ccccctgagg gctggaggcc caaggtcggg gaggggaggg aaaagcagca cccacaggga
1261 gcgcctgcga ggtttcttct catcaccagc tcagctaggc cgggcagaca aggacagaag
1321 actctgggcc actgtaatgt t
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