LOCUS BC093052 1375 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens actin, alpha 2, smooth muscle, aorta, mRNA (cDNA clone
MGC:111131 IMAGE:30351093), complete cds.
ACCESSION BC093052
VERSION BC093052.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1375)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1375)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-APR-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Michael Brownstein and Dr. Miklos Palkovits
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 68 Row: b Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 4501882.
FEATURES Location/Qualifiers
source 1..1375
/db_xref="H-InvDB:HIT000334543"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:111131 IMAGE:30351093"
/tissue_type="Glandular pool- thyroid, parathyroid,
adrenal cortex, pineal gland, submandibular gland."
/clone_lib="NIH_MGC_184"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1375
/gene="ACTA2"
/gene_synonym="ACTSA"
/db_xref="GeneID:59"
/db_xref="HGNC:HGNC:130"
/db_xref="MIM:102620"
CDS 66..1199
/gene="ACTA2"
/gene_synonym="ACTSA"
/codon_start=1
/product="actin, alpha 2, smooth muscle, aorta"
/protein_id="AAH93052.1"
/db_xref="GeneID:59"
/db_xref="HGNC:HGNC:130"
/db_xref="MIM:102620"
/translation="MCEEEDSTALVCDNGSGLCKAGFAGDDAPRAVFPSIVGRPRHQG
VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEE
HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDG
VTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKL
CYVALDFENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGI
HETTYNSIMKCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP
PERKYSVWIGGSILASLSTFQQMWISKQEYDEAGPSIVHRKCF"
BASE COUNT 360 a 370 c 329 g 316 t
ORIGIN
1 aacaccaccc agtgtggagc agcccagcca agcactgtca ggaatcctgt gaagcagctc
61 cagctatgtg tgaagaagag gacagcactg ccttggtgtg tgacaatggc tctgggctct
121 gtaaggccgg ctttgctggg gacgatgctc ccagggctgt tttcccatcc attgtgggac
181 gtcccagaca tcagggggtg atggtgggaa tgggacaaaa agacagctac gtgggtgacg
241 aagcacagag caaaagagga atcctgaccc tgaagtaccc gatagaacat ggcatcatca
301 ccaactggga cgacatggaa aagatctggc accactcttt ctacaatgag cttcgtgttg
361 cccctgaaga gcatcccacc ctgctcacgg aggcacccct gaaccccaag gccaaccggg
421 agaaaatgac tcaaattatg tttgagactt tcaatgtccc agccatgtat gtggctatcc
481 aggcggtgct gtctctctat gcctctggac gcacaactgg catcgtgctg gactctggag
541 atggtgtcac ccacaatgtc cccatctatg agggctatgc cttgccccat gccatcatgc
601 gtctggatct ggctggccga gatctcactg actacctcat gaagatcctg actgagcgtg
661 gctattcctt cgttactact gctgagcgtg agattgtccg ggacatcaag gagaaactgt
721 gttatgtagc tctggacttt gaaaatgaga tggccactgc cgcatcctca tcctcccttg
781 agaagagtta cgagttgcct gatgggcaag tgatcaccat cggaaatgaa cgtttccgct
841 gcccagagac cctgttccag ccatccttca tcgggatgga gtctgctggc atccatgaaa
901 ccacctacaa cagcatcatg aagtgtgata ttgacatcag gaaggacctc tatgctaaca
961 atgtcctatc agggggcacc actatgtacc ctggcattgc cgaccgaatg cagaaggaga
1021 tcacggccct agcacccagc accatgaaga tcaagatcat tgcccctccg gagcgcaaat
1081 actctgtctg gatcggtggc tccatcctgg cctctctgtc caccttccag cagatgtgga
1141 tcagcaaaca ggaatacgat gaagccgggc cttccattgt ccaccgcaaa tgcttctaaa
1201 acactttcct gctcctctct gtctctagca cacaactgtg aatgtcctgt ggaattatgc
1261 cttcagttct tttccaaatc attcctagcc aaagctctga ctcgttacct atgtgttttt
1321 taataaatct gaaataggct actggcaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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