LOCUS BC084580 1902 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens serine incorporator 2, mRNA (cDNA clone MGC:90340
IMAGE:6500683), complete cds.
ACCESSION BC084580
VERSION BC084580.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1902)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1902)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-OCT-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 174 Row: o Column: 24.
FEATURES Location/Qualifiers
source 1..1902
/db_xref="H-InvDB:HIT000266088"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:90340 IMAGE:6500683"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1902
/gene="SERINC2"
/gene_synonym="FKSG84"
/gene_synonym="PRO0899"
/gene_synonym="TDE2"
/db_xref="GeneID:347735"
/db_xref="HGNC:HGNC:23231"
CDS 39..1409
/gene="SERINC2"
/gene_synonym="FKSG84"
/gene_synonym="PRO0899"
/gene_synonym="TDE2"
/codon_start=1
/product="serine incorporator 2"
/protein_id="AAH84580.1"
/db_xref="GeneID:347735"
/db_xref="HGNC:HGNC:23231"
/translation="MGACLGACSLLSCASCLCGSAPCILCSCCPASRNSTVSRLIFTF
FLFLGVLVSIIMLSPGVESQLYKLPWVCEEGAGIPTVLQGHIDCGSLLGYRAVYRMCF
ATAAFFFFFTLLMLCVSSSRDPRAAIQNGFWFFKFLILVGLTVGAFYIPDGSFTNIWF
YFGVVGSFLFILIQLVLLIDFAHSWNQRWLGKAEECDSRAWYAGLFFFTLLFYLLSIA
AVALMFMYYTEPSGCHEGKVFISLNLTFCVCVSIAAVLPKVQDAQPNSGLLQASVITL
YTMFVTWSALSSIPEQKCNPHLPTQLGNETVVAGPEGYETQWWDAPSIVGLIIFLLCT
LFISLRSSDHRQVNSLMQTEECPPMLDATQQQQQQVAACEGRAFDNEQDGVTYSYSFF
HFCLVLASLHVMMTLTNWYKPGETRKMISTWTAVWVKICASWAGLLLYLWTLVAPLLL
RNRDFS"
BASE COUNT 307 a 681 c 507 g 407 t
ORIGIN
1 cgcccggcgc cgggcgcccg aagccgggag ccgccgccat gggggcctgc ctgggagcct
61 gctccctgct cagctgcgcg tcctgcctct gcggctctgc cccctgcatc ctgtgcagct
121 gctgccccgc cagccgcaac tccaccgtga gccgcctcat cttcacgttc ttcctcttcc
181 tgggggtgct ggtgtccatc attatgctga gcccgggcgt ggagagtcag ctctacaagc
241 tgccctgggt gtgtgaggag ggggccggga tccccaccgt cctgcagggc cacatcgact
301 gtggctccct gcttggctac cgcgctgtct accgcatgtg cttcgccacg gcggccttct
361 tcttcttttt caccctgctc atgctctgcg tgagcagcag ccgggacccc cgggctgcca
421 tccagaatgg gttttggttc tttaagttcc tgatcctggt gggcctcacc gtgggtgcct
481 tctacattcc tgacggctcc ttcaccaaca tctggttcta cttcggcgtc gtgggctcct
541 tcctcttcat cctcatccag ctggtgctgc tcatcgactt tgcgcactcc tggaaccagc
601 ggtggctggg caaggccgag gagtgcgatt cccgtgcctg gtacgcaggc ctcttcttct
661 tcactctcct cttctacttg ctgtcgatcg cggccgtggc gctgatgttc atgtactaca
721 ctgagcccag cggctgccac gagggcaagg tcttcatcag cctcaacctc accttctgtg
781 tctgcgtgtc catcgctgct gtcctgccca aggtccagga cgcccagccc aactcgggtc
841 tgctgcaggc ctcggtcatc accctctaca ccatgtttgt cacctggtca gccctatcca
901 gtatccctga acagaaatgc aacccccatt tgccaaccca gctgggcaac gagacagttg
961 tggcaggccc cgagggctat gagacccagt ggtgggatgc cccgagcatt gtgggcctca
1021 tcatcttcct cctgtgcacc ctcttcatca gtctgcgctc ctcagaccac cggcaggtga
1081 acagcctgat gcagaccgag gagtgcccac ctatgctaga cgccacacag cagcagcagc
1141 agcaggtggc agcctgtgag ggccgggcct ttgacaacga gcaggacggc gtcacctaca
1201 gctactcctt cttccacttc tgcctggtgc tggcctcact gcacgtcatg atgacgctca
1261 ccaactggta caagcccggt gagacccgga agatgatcag cacgtggacc gccgtgtggg
1321 tgaagatctg tgccagctgg gcagggctgc tcctctacct gtggaccctg gtagccccac
1381 tcctcctgcg caaccgcgac ttcagctgag gcagcctcac agcctgccat ctggtgcctc
1441 ctgccacctg gtgcctctcg gctcggtgac agccaacctg ccccctcccc acaccaatca
1501 gccaggctga gcccccaccc ctgccccagc tccaggacct gcccctgagc cgggccttct
1561 agtcgtagtg ccttcagggt ccgaggagca tcaggctcct gcagagcccc atccccccgc
1621 cacacccaca cggtggagct gcctcttcct tcccctcctc cctgttgccc atactcagca
1681 tctcggatga aagggctccc ttgtcctcag gctccacggg agcggggctg ctggagagag
1741 cggggaactc ccaccacagt ggggcatccg gcactgaagc cctggtgttc ctggtcacgt
1801 cccccagggg accctgcccc cttcctggac ttcgtgcctt actgagtctc taagactttt
1861 tctaataaac aagccagtgc gtgtaccaaa aaaaaaaaaa aa
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