LOCUS BC081560 1049 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens H3 histone, family 3B (H3.3B), mRNA (cDNA clone
MGC:87782 IMAGE:3884607), complete cds.
ACCESSION BC081560
VERSION BC081560.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1049)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1049)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-SEP-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 166 Row: a Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 52630340.
FEATURES Location/Qualifiers
source 1..1049
/db_xref="H-InvDB:HIT000265934"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87782 IMAGE:3884607"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1049
/gene="H3F3B"
/gene_synonym="H3.3B"
/gene_synonym="H3F3A"
/db_xref="GeneID:3021"
/db_xref="HGNC:HGNC:4765"
/db_xref="MIM:601058"
CDS 102..512
/gene="H3F3B"
/gene_synonym="H3.3B"
/gene_synonym="H3F3A"
/codon_start=1
/product="H3 histone, family 3B (H3.3B)"
/protein_id="AAH81560.1"
/db_xref="GeneID:3021"
/db_xref="HGNC:HGNC:4765"
/db_xref="MIM:601058"
/translation="MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRP
GTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLV
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA"
BASE COUNT 307 a 220 c 224 g 298 t
ORIGIN
1 gccgccgccg cgccgccgtc gctctccaac gccagcgccg cctctcgctc gccgagctcc
61 agccgaagga gaaggggggt aagtaaggag gtctctgtac catggctcgt acaaagcaga
121 ctgcccgcaa atcgaccggt ggtaaagcac ccaggaagca actggctaca aaagccgctc
181 gcaagagtgc gccctctact ggaggggtga agaaacctca tcgttacagg cctggtactg
241 tggcgctccg tgaaattaga cgttatcaga agtccactga acttctgatt cgcaaacttc
301 ccttccagcg tctggtgcga gaaattgctc aggactttaa aacagatctg cgcttccaga
361 gcgcagctat cggtgctttg caggaggcaa gtgaggccta tctggttggc ctttttgaag
421 acaccaacct gtgtgctatc catgccaaac gtgtaacaat tatgccaaaa gacatccagc
481 tagcacgccg catacgtgga gaacgtgctt aagaatccac tatgatggga aacatttcat
541 tctcaaaaaa aaaaaaaaaa tttctcttct tcctgttatt ggtagttctg aacgttagat
601 attttttttc catggggtca aaaggtacct aagtatatga ttgcgagtgg aaaaataggg
661 gacagaaatc aggtattggc agtttttcca ttttcatttg tgtgtgaatt tttaatataa
721 atgcggagac gtaaagcatt aatgcaagtt aaaatgtttc agtgaacaag tttcagcggt
781 tcaactttat aataattata aataaacctg ttaaattttt ctggacaatg ccagcatttg
841 gattttttta aaacaagtaa atttcttatt gatggcaact aaatggtgtt tgtagcattt
901 ttatcataca gtagattcca tccattcact atacttttct aactgagttg tcctacatgc
961 aagtacatgt ttttaatgtt gtctgtcttc tgtgctgttc ctgtaagttt gctattaaaa
1021 tacattaaac tataaaaaaa aaaaaaaaa
//