LOCUS BC078660 5215 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens phosphodiesterase 4D interacting protein, mRNA (cDNA clone IMAGE:5309814), complete cds. ACCESSION BC078660 VERSION BC078660.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5215) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5215) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-AUG-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: David N. Louis, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 166 Row: n Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50658070 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..5215 /db_xref="H-InvDB:HIT000265747" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5309814" /tissue_type="Brain, anaplastic oligodendroglioma with 1p/19q loss" /clone_lib="NCI_CGAP_Brn67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..5215 /gene="PDE4DIP" /gene_synonym="MMGL" /db_xref="GeneID:9659" /db_xref="HGNC:HGNC:15580" /db_xref="MIM:608117" CDS 164..3562 /gene="PDE4DIP" /gene_synonym="MMGL" /codon_start=1 /product="phosphodiesterase 4D interacting protein" /protein_id="AAH78660.1" /db_xref="GeneID:9659" /db_xref="HGNC:HGNC:15580" /db_xref="MIM:608117" /translation="MKEICRICARELCGNQRRWIFHTASKLNLQVLLSHVLGKDVPRD GKAEFACSKCAFMLDRIYRFDTVIARIEALSIERLQKLLLEKDRLKFCIASMYRKNND DSGAEIKAGNGTVDMSVLPDARYSALLQEDFAYSGFECWVENEDQIQEPHSCHGSEGP GNRPRRCRGCAALRVADSDYEAICKVPRKVARSISCGPSSRWSTSICTEEPALSEVGP PDLASTKVPPDGESMEEETPGSSVESLDASVQASPPQQKDEETERSAKELGKCDCCSD DQAPQHGCNHKLELALSMIKGLDYKPIQSPRGSRLPIPVKSSLPGAKPGPSMTDGVSS GFLNRSLKPLYKTPVSYPLELSDLQELWDDLCEDYLPLRVQPMTEELLKQQKLNSHET TITQQSVSDSHLAELQEKIQQTEATNKILQEKLNEMSYELKCAQESSQKQDGTIQNLK ETLKSRERETEELYQVIEGQNDTMAKLREMLHQSQLGQLHSSEGTSPAQQQVALLDLQ SALFCSQLEIQKLQRVVRQKERQLADAKQCVQFVEAAAHESEQQKEASWKHNQELRKA LQQLQEELQNKSQQLRAWEAEKYNEIRTQEQNIQHLNHSLSHKEQLLQEFRELLQYRD NSDKTLEANEMLLEKLRQRIHDKAVALERAIDEKFSALEEKEKELRQLRLAVRERDHD LERLRDVLSSNEATMQSMESLLRAKGLEVEQLSTTCQNLQWLKEEMETKFSRWQKEQE SIIQQLQTSLHDRNKEVEDLSATLLCKLGPGQSEIAEELCQRLQRKERMLQDLLSDRN KQVLEHEMEIQGLLQSVSTREQESQAAAEKLVQALMERNSELQALRQYLGGRDSLMSQ APISNQQAEVTPTGRLGKQTDQGSMQIPSRDDSTSLTAKEDVSIPRSTLGDLDTVAGL EKELSNAKEELELMAKKERESQMELSALQSMMAVQEEELQVQAADMESLTRNIQIKED LIKDLQMQLVDPEDIPAMERLTQEVLLLREKVASVESQGQEISGNRRQQLLLMLEGLV DERSRLNEALQAERQLYSSLVKFHAHPESSERDRTLQVELEGAQVLRSRLEEVLGRSL ERLNRLETLAAIGGAAAGDDTEDTSTEFTDSIEEEAAHHSHQQL" BASE COUNT 1535 a 1159 c 1309 g 1212 t ORIGIN 1 ggcaggggcg cgcccctgca gagtggggac cccactgggc tgtgccatgc tgaccggaga 61 ccaccgaggc gggagacaga gcgcggcgaa gagccattga gtggtcaccc agtagccgcc 121 gccgccgccg cctcgggaag cttgccaccc gctaggaggg aagatgaagg agatttgcag 181 gatctgtgcc cgagagctgt gtggaaacca gcggcgctgg atcttccaca cggcgtccaa 241 gctcaatctc caggttctgc tttcgcacgt cttgggcaag gatgtccccc gcgatggcaa 301 agccgagttc gcttgcagca agtgtgcttt catgcttgat cgaatctatc gattcgacac 361 agttattgcc cggattgaag cgctttctat tgagcgcttg caaaagctgc tactggagaa 421 ggatcgcctc aagttctgca ttgccagtat gtatcggaag aataacgatg actctggcgc 481 ggagatcaag gcggggaatg ggacggttga catgtccgtc ttacccgatg cgagatactc 541 tgcactgctc caggaggact tcgcctattc agggtttgag tgctgggtgg agaatgagga 601 tcagatccag gagccacaca gctgccatgg ttcagaaggc cctggaaacc gacccaggag 661 atgccgtggt tgtgccgctt tgcgggttgc tgattctgac tatgaagcca tttgtaaggt 721 acctcgaaag gtggccagaa gtatctcctg cggcccttct agcaggtggt cgaccagcat 781 ttgcactgaa gaaccagcgt tgtctgaggt tgggccaccc gacttagcaa gcacaaaggt 841 acccccagat ggagaaagca tggaggaaga gacgcctggt tcctctgtgg aatctttgga 901 tgcaagcgtc caggctagcc ctccacaaca gaaagatgag gagactgaga gaagtgcaaa 961 ggaacttgga aagtgtgact gttgttcaga tgatcaggct ccgcagcatg ggtgtaatca 1021 caagctggaa ttagctctta gcatgattaa aggtcttgat tataagccca tccagagccc 1081 ccgagggagc aggcttccga ttccagtgaa atccagccta cctggagcca agcctggccc 1141 tagcatgaca gatggagtta gttccggttt ccttaacagg tctttgaaac ccctttacaa 1201 gacacctgtg agttatccct tggagctttc agacctgcag gagctgtggg atgatctctg 1261 tgaagattat ttgccgctcc gggtccagcc catgactgaa gagttgctga aacaacaaaa 1321 gctgaattca catgagacca ctataactca gcagtctgta tctgattccc acttggcaga 1381 actccaggaa aaaatccagc aaacagaggc caccaacaag attcttcaag agaaacttaa 1441 tgaaatgagc tatgaactaa agtgtgctca ggagtcgtct caaaagcaag atggtacaat 1501 tcagaacctc aaggaaactc tgaaaagcag ggaacgtgag actgaggagt tgtaccaggt 1561 aattgaaggt caaaatgaca caatggcaaa gcttcgagaa atgctgcacc aaagccagct 1621 tggacaactt cacagctcag agggtacttc tccagctcag caacaggtag ctctgcttga 1681 tcttcagagt gctttattct gcagccaact tgaaatacag aagctccaga gggtggtacg 1741 acagaaagag cgccaactgg ctgatgccaa acaatgtgtg caatttgtag aggctgcagc 1801 acacgagagt gaacagcaga aagaggcttc ttggaaacat aaccaggaat tgcgaaaagc 1861 cttgcagcag ctacaagaag aattgcagaa taagagccaa cagcttcgtg cctgggaggc 1921 tgaaaaatac aatgagattc gaacccagga acaaaacatc cagcacctaa accatagtct 1981 gagtcacaag gagcagttgc ttcaggaatt tcgggagctc ctacagtatc gagataactc 2041 agacaaaacc cttgaagcaa atgaaatgtt gcttgagaaa cttcgccagc gaatacatga 2101 taaagctgtt gctctggagc gggctataga tgaaaaattc tctgctctag aagagaaaga 2161 aaaagaactg cgccagcttc gtcttgctgt gagagagcga gatcatgact tagagagact 2221 gcgcgatgtc ctctcctcca atgaagctac tatgcaaagt atggagagtc tcctgagggc 2281 caaaggcctg gaagtggaac agttatctac tacctgtcaa aacctccagt ggctgaaaga 2341 agaaatggaa accaaattta gccgttggca gaaggaacaa gagagtatca ttcagcagtt 2401 acagacgtct cttcatgata ggaacaaaga agtggaggat cttagtgcaa cactgctctg 2461 caaacttgga ccagggcaga gtgagatagc agaggagctg tgccagcgtc tacagcgaaa 2521 ggaaaggatg ctgcaggacc ttctaagtga tcgaaataaa caagtgctgg aacatgaaat 2581 ggagattcaa ggcctgcttc agtctgtgag caccagggag caggaaagcc aagctgctgc 2641 agagaagttg gtgcaagcct taatggaaag aaattcagaa ttacaggccc tgcgccaata 2701 tttaggaggg agagactccc tgatgtccca agcacccatc tctaaccaac aagctgaagt 2761 tacccccact ggccgtcttg gaaaacagac tgatcaaggt tcaatgcaga taccttccag 2821 agatgatagc acttcattga ctgccaaaga ggatgtcagc atacccagat ccacattagg 2881 agacttggac acagttgcag ggctggaaaa agaactgagt aatgccaaag aggaacttga 2941 actcatggct aaaaaagaaa gagaaagtca gatggaactt tctgctctac agtccatgat 3001 ggctgtgcag gaagaagagc tgcaggtgca ggctgctgat atggagtctc tgaccaggaa 3061 catacagatt aaagaagatc tcataaagga cctgcaaatg caactggttg atcctgaaga 3121 cataccagct atggaacgcc tgacccagga agtcttactt cttcgggaaa aagttgcttc 3181 agtagaatcc cagggtcaag aaatttcagg aaaccgaaga caacagttgc tgctgatgct 3241 agaaggacta gtagatgaac ggagtcggct caatgaggcc ttacaagcag agagacagct 3301 ctatagcagt ctggtgaagt tccatgccca tccagagagc tctgagagag accgaactct 3361 gcaggtggaa ctggaagggg ctcaggtgtt acgcagtcgg ctagaagaag ttcttggaag 3421 aagcttggag cgcttaaaca ggctggagac cctggccgcc attggaggtg cagctgcagg 3481 ggatgacacc gaagatacaa gcactgagtt cactgacagt attgaggagg aggctgcaca 3541 ccatagtcac cagcaactat agcttcagaa gcatttttac ttgcaagacg atggacacat 3601 tccccttggg ctttttgtaa ctgaaacgca ccacagaaga cagggagtca tcgaagggct 3661 gctcggggag gtggcagggc ggaggacctg cttgggaaga aactccaaga agattggaat 3721 gcttccaaag caagaatctt tctcagtgaa atctcattat acaaagagaa ccttatgcaa 3781 cctgacaaac cactgaggtc atggtgactc agtgatcagc agatggtact tcaacagcaa 3841 tcccctgtca aacctcagaa cttgaggctg aaacattgct tccacccacc atcagtgaag 3901 atgtaactag catgttacaa gagtgaataa tctggacttc agagattaag tcaccaatag 3961 tgatctcaca agcactcacc ggaactccta taatgtctcc actttgtcca tgccatttag 4021 caatctcatc tcctaaatgg actgtgccta tgattcttaa ggagaaagtg aatcattggt 4081 agatatcctg cacaagcagc tggactttcc agtaatagct ttcttggggc tattaggaaa 4141 attaaacaag aaatgaggct ttctgggtct gcctgtatgt cttctgcata agacaaagaa 4201 gagacatcga atcaaccaat aagaagagcc caaataagca tcctcaaatc ttttgggatt 4261 tggcacttgg ggacatgagt agttgtctgg gatacgtcat attctcaaca gtttctttgt 4321 agtagtagga tcaccttctt ataataggat caccttcttg ttgctatagc tgtacccgac 4381 cttcccttct cccttgagtg cttgcatgag ctccactttt ccttttgctt gaacagcttc 4441 tcctgagtcc tccttaccga tggttgtgac tttaattata tacatctctg tccctccaga 4501 cagatccctc tgtcctcact ctctgatttc attgaggatc ttgggtgaga gagagggacc 4561 tgcaggatga acaaatgtct actctaagac agctagattg ggaggttggc tggtcactga 4621 tggttataat gactgtggga caggattaac ttcagaataa atgaacagga gacacagata 4681 tgaagaaagt ttctgattga tatggtctga agtactcctg gtattgcaag tcatttgctc 4741 taattctcaa ttgtaggcaa actgatttgt aaatttgctt cttcagcctt ctttcctgta 4801 gcctagcatg gagaatctga ccagacccca ttttgagaag gtcagcctac actggaatga 4861 actttttaca ttagggcatt tgtatttccc tcacaatact tgccacatta cttggcatag 4921 gagagatgct tagtgtaatt ataagttaac aagcctttgg atcagggctt gactcatgat 4981 agacaaagta tatgcctgct ggatggaaga atctcttggg cgagcaccat ttttctttcc 5041 atcacctttc cttgaaaata tatcttcagc tttgggtagg aggaatcttg gtgtatgaaa 5101 tcattgcaaa tttacttcat cttttctgga gtttgaagtt gtgactctcc tgctaccaat 5161 taaataaagc ttactttgcc ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //