LOCUS BC071937 1192 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 414, mRNA (cDNA clone MGC:88624
IMAGE:5089259), complete cds.
ACCESSION BC071937
VERSION BC071937.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1192)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1192)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-JUN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 58 Row: f Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14150190.
FEATURES Location/Qualifiers
source 1..1192
/db_xref="H-InvDB:HIT000264744"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:88624 IMAGE:5089259"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1192
/gene="ZNF414"
/gene_synonym="MGC15716"
/gene_synonym="Zfp414"
/db_xref="GeneID:84330"
/db_xref="HGNC:HGNC:20630"
CDS 98..1036
/gene="ZNF414"
/gene_synonym="MGC15716"
/gene_synonym="Zfp414"
/codon_start=1
/product="zinc finger protein 414"
/protein_id="AAH71937.1"
/db_xref="GeneID:84330"
/db_xref="HGNC:HGNC:20630"
/translation="MEEKPSGPIPDMLATAEPSSSETDKEVLSPAVPAAAPSSSMSEE
PGPEQAATPPVWERGGAGGMRQGSSPAPDSCQPGPGPSPGLTSIVSGTSEDLRPPRRR
PPPGKQIPCSSPGCCLSFPSVRDLAQHLRTHCPPTQSLEGKLFRCSALSCTETFPSMQ
ELVAHSKLHYKPNRYFKCENCLLRFRTHRSLFKHLHVCAEHAQSPAPPPPPALDREPP
APERPPEVDPASAPGLPFPLLEPFTTPAPAPTGPFLPYLNPAPFGLSPPRLRPFLAAA
PGPPASSAAVWKKSQGAGSSPRRPQGGSDAPSGACR"
BASE COUNT 227 a 455 c 340 g 170 t
ORIGIN
1 gctgacgtga gcgcgaactc gcactgccca gagggtggcc gccgcctaag ctgcagccgc
61 cggagccgca gaaacaagag gccgagccgt gtcgaagatg gaggagaaac cctcagggcc
121 catcccagac atgctggcca ctgcagagcc cagctccagt gagaccgaca aggaggtgtt
181 gtccccggct gtgccagctg cagccccttc ctcctccatg tcggaggagc caggccctga
241 gcaggcagcc acaccgccag tgtgggaacg tggaggggct ggagggatgc ggcagggctc
301 ctccccagcc ccagacagct gccagcctgg ccccggaccc agccctggcc tgaccagcat
361 agtctccggg accagcgagg acctgcggcc tcccagacga cgcccacctc cagggaagca
421 aatcccttgc tccagccctg gctgctgcct cagttttccc agcgtccgtg acctggcaca
481 gcatctgcga acccactgcc cgcccacaca gtccctggaa ggcaagctct tccgctgctc
541 agccctgagc tgcaccgaga ccttccccag catgcaggag ctggtggctc acagcaaact
601 gcactacaaa cccaatcgct acttcaagtg tgagaactgc ctcctgcgct tccgcacgca
661 ccgctcgctc ttcaagcacc tgcatgtttg cgcggagcat gcgcagagcc cagccccgcc
721 gccacccccg gccctggacc gagagccgcc cgcgccggag cgccccccgg aggttgaccc
781 cgcatcagcg ccgggcctgc cgttcccgct gctggaaccc ttcacgaccc ccgcccctgc
841 ccccaccgga ccgttcctgc cctacttgaa ccctgcgccc tttggcctaa gccccccgcg
901 cctgcgcccc ttcctggccg ctgcacccgg gccgccggct tccagcgccg ccgtctggaa
961 aaagagccaa ggtgctggca gcagcccccg aagaccccag ggcggctccg acgcgccctc
1021 aggtgcgtgc aggtgaccac cagggagggg tggaggggct ttctttcctg cgccctgcgg
1081 ggtccggtgg ataccaggag gcagcagtgc tcatcccctt cccagggggc acaaatgcca
1141 ccgtcccgaa atacaggatt tttgccttaa aaacaaaaaa aaaaaaaaaa aa
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