LOCUS BC070080 4778 bp mRNA linear HUM 25-JUN-2004
DEFINITION Homo sapiens aryl hydrocarbon receptor, mRNA (cDNA clone MGC:87401
IMAGE:30342582), complete cds.
ACCESSION BC070080
VERSION BC070080.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4778)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4778)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Stefan Hansson
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 168 Row: l Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5016091.
FEATURES Location/Qualifiers
source 1..4778
/db_xref="H-InvDB:HIT000264038"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87401 IMAGE:30342582"
/tissue_type="Placenta, normal"
/clone_lib="NIH_MGC_147"
/lab_host="DH10B"
/note="Vector: pBluescript"
gene 1..4778
/gene="AHR"
/db_xref="GeneID:196"
/db_xref="MIM:600253"
CDS 532..3078
/gene="AHR"
/codon_start=1
/product="AHR protein"
/protein_id="AAH70080.1"
/db_xref="GeneID:196"
/db_xref="MIM:600253"
/translation="MNSSSANITYASRKRRKPVQKTVKPIPAEGIKSNPSKRHRDRLN
TELDRLASLLPFPQDVINKLDKLSVLRLSVSYLRAKSFFDVALKSSPTERNGGQDNCR
AANFREGLNLQEGEFLLQALNGFVLVVTTDALVFYASSTIQDYLGFQQSDVIHQSVYE
LIHTEDRAEFQRQLHWALNPSQCTESGQGIEEATGLPQTVVCYNPDQIPPENSPLMER
CFICRLRCLLDNSSGFLAMNFQGKLKYLHGQKKKGKDGSILPPQLALFAIATPLQPPS
ILEIRTKNFIFRTKHKLDFTPIGCDAKGRIVLGYTEAELCTRGSGYQFIHAADMLYCA
ESHIRMIKTGESGMIVFRLLTKNNRWTWVQSNARLLYKNGRPDYIIVTQRPLTDEEGT
EHLRKRNTKLPFMFTTGEAVLYEATNPFPAIMDPLPLRTKNGTSGKDSATTSTLSKDS
LNPSSLLAAMMQQDESIYLYPASSTSSTAPFENNFFNESMNECRNWQDNTAPMGNDTI
LKHEQIDQPQDVNSFAGGHPGLFQDSKNSDLYSIMKNLGIDFEDIRHMQNEKFFRNDF
SGEVDFRDIDLTDEILTYVQDSLSKSPFIPSDYQQQQSLALNSSCMVQEHLHLEQQQQ
HHQKQVVVEPQQQLCQKMKHMQVNGMFENWNSNQFVPFNCPQQDPQQYNVFTDLHGIS
QEFPYKSEMDSMPYTQNFISCNQPVLPQHSKCTELDYPMGSFEPSPYPTTSSLEDFVT
CLQLPENQKHGLNPQSAIITPQTCYAGAVSMYQCQPEPQHTHVGQMQYNPVLPGQQAF
LNKFQNGVLNETYPAELNNINNTQTTTHLQPLHHPSEARPFPDLTSSGFL"
BASE COUNT 1451 a 1045 c 925 g 1357 t
ORIGIN
1 gaacggaagc tgggagcagc cgggactggt ggcccgcgcc cgagctccgc aggcgggaag
61 caccctggat ttgggaagtc ccgggagcag cgcggcggca cctccctcac ccaaggggcc
121 gcggcgacgg tcacggggcg cggcgccacc gtgagcgacc caggccagga ttctaaatag
181 acggcccagg ctcctcctcc gcccgggccg cctcacctgc gggcattgcc gcgccgcctc
241 cgccggtgta gacggcacct gcgccgcctt gctcgcgggt ctccgcccct cgcccaccct
301 cactgcgcca ggcccaggca gctcacctgt actggcgcgg gctgcggaag cctgcgtgag
361 ccgaggcgtt gaggcgcggc gcccacgcca ctgtcccgag aggacgcagg tggagcgggc
421 gcggcttcgc ggaacccggc gccggccgcc gcagtggtcc cagcctacac cgggttccgg
481 ggacccggcc gccagtgccc ggggagtagc cgccgccgtc ggctgggcac catgaacagc
541 agcagcgcca acatcaccta cgccagtcgc aagcggcgga agccggtgca gaaaacagta
601 aagccaatcc cagctgaagg aatcaagtca aatccttcca agcggcatag agaccgactt
661 aatacagagt tggaccgttt ggctagcctg ctgcctttcc cacaagatgt tattaataag
721 ttggacaaac tttcagttct taggctcagc gtcagttacc tgagagccaa gagcttcttt
781 gatgttgcat taaaatcctc ccctactgaa agaaacggag gccaggataa ctgtagagca
841 gcaaatttca gagaaggcct gaacttacaa gaaggagaat tcttattaca ggctctgaat
901 ggctttgtat tagttgtcac tacagatgct ttggtctttt atgcttcttc tactatacaa
961 gattatctag ggtttcagca gtctgatgtc atacatcaga gtgtatatga acttatccat
1021 accgaagacc gagctgaatt tcagcgtcag ctacactggg cattaaatcc ttctcagtgt
1081 acagagtctg gacaaggaat tgaagaagcc actggtctcc cccagacagt agtctgttat
1141 aacccagacc agattcctcc agaaaactct cctttaatgg agaggtgctt catatgtcgt
1201 ctaaggtgtc tgctggataa ttcatctggt tttctggcaa tgaatttcca agggaagtta
1261 aagtatcttc atggacagaa aaagaaaggg aaagatggat caatacttcc acctcagttg
1321 gctttgtttg cgatagctac tccacttcag ccaccatcca tacttgaaat ccggaccaaa
1381 aattttatct ttagaaccaa acacaaacta gacttcacac ctattggttg tgatgccaaa
1441 ggaagaattg ttttaggata tactgaagca gagctgtgca cgagaggctc aggttatcag
1501 tttattcatg cagctgatat gctttattgt gccgagtccc atatccgaat gattaagact
1561 ggagaaagtg gcatgatagt tttccggctt cttacaaaaa acaaccgatg gacttgggtc
1621 cagtctaatg cacgcctgct ttataaaaat ggaagaccag attatatcat tgtaactcag
1681 agaccactaa cagatgagga aggaacagag catttacgaa aacgaaatac gaagttgcct
1741 tttatgttta ccactggaga agctgtgttg tatgaggcaa ccaacccttt tcctgccata
1801 atggatccct taccactaag gactaaaaat ggcactagtg gaaaagactc tgctaccaca
1861 tccactctaa gcaaggactc tctcaatcct agttccctcc tggctgccat gatgcaacaa
1921 gatgagtcta tttatctcta tcctgcttca agtacttcaa gtactgcacc ttttgaaaac
1981 aactttttca acgaatctat gaatgaatgc agaaattggc aagataatac tgcaccgatg
2041 ggaaatgata ctatcctgaa acatgagcaa attgaccagc ctcaggatgt gaactcattt
2101 gctggaggtc acccagggct ctttcaagat agtaaaaaca gtgacttgta cagcataatg
2161 aaaaacctag gcattgattt tgaagacatc agacacatgc agaatgaaaa atttttcaga
2221 aatgattttt ctggtgaggt tgacttcaga gacattgact taacggatga aatcctgacg
2281 tatgtccaag attctttaag taagtctccc ttcatacctt cagattatca acagcaacag
2341 tccttggctc tgaactcaag ctgtatggta caggaacacc tacatctaga acagcaacag
2401 caacatcacc aaaagcaagt agtagtggag ccacagcaac agctgtgtca gaagatgaag
2461 cacatgcaag ttaatggcat gtttgaaaat tggaactcta accaattcgt gcctttcaat
2521 tgtccacagc aagacccaca acaatataat gtctttacag acttacatgg gatcagtcaa
2581 gagttcccct acaaatctga aatggattct atgccttata cacagaactt tatttcctgt
2641 aatcagcctg tattaccaca acattccaaa tgtacagagc tggactaccc tatggggagt
2701 tttgaaccat ccccataccc cactacttct agtttagaag attttgtcac ttgtttacaa
2761 cttcctgaaa accaaaagca tggattaaat ccacagtcag ccataataac tcctcagaca
2821 tgttatgctg gggccgtgtc gatgtatcag tgccagccag aacctcagca cacccacgtg
2881 ggtcagatgc agtacaatcc agtactgcca ggccaacagg catttttaaa caagtttcag
2941 aatggagttt taaatgaaac atatccagct gaattaaata acataaataa cactcagact
3001 accacacatc ttcagccact tcatcatccg tcagaagcca gaccttttcc tgatttgaca
3061 tccagtggat tcctgtaatt ccaagcccaa ttttgaccct ggtttttgga ttaaattagt
3121 ttgtgaagga ttatggaaaa ataaaactgt cactgttgga cgtcagcaag ttcacatgga
3181 ggcattgatg catgctattc acaattattc caaaccaaat tttaattttt gcttttagaa
3241 aagggagttt aaaaatggta tcaaaattac atatactaca gtcaagatag aaagggtgct
3301 gccacggagt ggtgaggtac cgtctacatt tcacattatt ctgggcacca caaaatatac
3361 aaaactttat cagggaaact aagattcttt taaattagaa aatattctct atttgaatta
3421 tttctgtcac agtaaaaata aaatactttg agttttgagc tactggattc ttattagttc
3481 cccaaataca aagttagaga actaaactag tttttcctat catgttaacc tctgctttta
3541 tctcagatgt taaaataaat ggtttggtgc tttttataaa aagataatct cagtgctttc
3601 ctccttcact gtttcatcta agtgcctcac atttttttct acctataaca ctctaggatg
3661 tatattttat ataaagtatt ctttttcttt tttaaattaa tatctttctg cacacaaata
3721 ttatttgtgt ttcctaaatc caaccatttt cattaattca ggcatatttt aactccactg
3781 cttacctact ttcttcaggt aaagggcaaa taatgatcga aaaaataatt atttattaca
3841 taatttagtt gtttctagac tataaatgtt gcagagccaa gatcgcccca ctgcactcca
3901 gcctggcaat agaccgagac tccgtctcca aaaaaaaaaa aatacaattt ttatttcttt
3961 tacttttttt agtaagttaa tgtatataaa aatggcttcg gacaaaatat ctctgagttc
4021 tgtgtatttt cagtcaaaac tttaaacctg tagaatcaat ttaagtgttg gaaaaaattt
4081 gtctgaaaca tttcataatt tgtttccagc atgaggtatc taaggattta gaccagaggt
4141 ctagattaat actctatttt tacatttaaa ccttttatta taagtcttac ataaaccatt
4201 tttgttactc tcttccacat gttactggat aaattgttta gtggaaaata ggctttttaa
4261 tcatgaatat gatgacaatc agttatacag ttataaaatt aaaagtttga aaagcaatat
4321 tgtatatttt tatctatata aaataactaa aatgtatcta agaataataa aatcacgtta
4381 aaccaaatac acgtttgtct gtattgttaa gtgccaaaca aaggatactt agtgcactgc
4441 tacattgtgg gatttatttc tagatgatgt gcacatctaa ggatatggat gtgtctaatt
4501 ttagtctttt cctgtaccag gtttttctta caatacctga agacttacca gtattctagt
4561 gtattatgaa gctttcaaca ttactatgca caaactagtg tttttcgatg ttactaaatt
4621 ttaggtaaat gctttcatgg cttttttctt caaaatgtta ctgcttacat atatcatgca
4681 tagatttttg cttaaagtat gatttataat atcctcatta tcaaagttgt atacaataat
4741 atataataaa ataacaaata cgaaaaaaaa aaaaaaaa
//