LOCUS BC068594 2810 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens chromosome 1 open reading frame 213, mRNA (cDNA clone
MGC:87626 IMAGE:4828713), complete cds.
ACCESSION BC068594
VERSION BC068594.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2810)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2810)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 167 Row: h Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 57232751.
FEATURES Location/Qualifiers
source 1..2810
/db_xref="H-InvDB:HIT000263149"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:87626 IMAGE:4828713"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2810
/gene="C1orf213"
/gene_synonym="FLJ90508"
/db_xref="GeneID:148898"
/db_xref="HGNC:HGNC:25122"
CDS 310..690
/gene="C1orf213"
/gene_synonym="FLJ90508"
/codon_start=1
/product="chromosome 1 open reading frame 213"
/protein_id="AAH68594.1"
/db_xref="GeneID:148898"
/db_xref="HGNC:HGNC:25122"
/translation="MLAVPVRLKVGSRKPEWGTNRLTSCPAKDPLDRRLQNLRDRERV
PEPQRSLRPGVQEDSREHGQVPEVSDPQVDLEFVDLQAKPRYRRLILKTQIPEASDSQ
AAQKPQAHRQIPETTEAGQETTSN"
BASE COUNT 668 a 678 c 779 g 685 t
ORIGIN
1 agtagagcct ggcggtgtct tggcttcggc gctttaaccc tgtaggggcg tgcgactgcg
61 tccttctcaa gggggcgccc ctcgagcggc gggctgagtg gcgtccagcg gcggggaggc
121 gaaaaccctg ggggactcag aagcgggtgg cggtgtaggg cgtgtaagga ggagatagcc
181 aggcccctgc ggggggggcg ggccctcctt agcgtcccag agggcttgtc tgctacaggg
241 gctcccagcg gcctcccgca ccgaagggac cctgggcgtc tgaggccctg atccgggcgg
301 gccttcagga tgttagcagt ccctgtccgg ttgaaggtag gaagccgaaa acccgagtgg
361 gggacgaaca gacttacctc ctgtcccgca aaagatccac tagatcgtcg tctccaaaac
421 ctgagagacc gcgaacgggt tccagagccg cagcgttctc tcagacctgg cgttcaggaa
481 gattctagag agcacgggca ggtcccggag gtctcagacc cgcaggtaga tctcgaattc
541 gtagacttgc aggcgaagcc cagatatcgt aggctgatcc taaagactca gattcccgag
601 gcctcagact cgcaggcagc tcagaaacca caggctcata ggcagatccc tgagaccaca
661 gaggctggcc aagaaaccac cagcaactaa gctgcattca gctggagttc ctcggaacgg
721 gaggactcgc agctctccct ttccccagcc aggatgaggg aattagacaa tggaagtcga
781 gcactgggga aagcaggcat tctgcgtggg gaagagctcc cagctcgctg tagccttgga
841 gagggaagtg atggaaaaag aatatagcag cttattaggg actcccaccc tcttcaagtt
901 ataaatatcc ccagaacctt ggctacgtgc ccggaagcct gttgtctcta actgtacagg
961 agacttctct gcctgggctg ggaaaggggc ctttcttttg ttttgcagat agatccaccc
1021 actgaggaac ttgaaaattt ttttcaaaca taactccagg ccttgctttt attagtgagt
1081 gtcctgttcc cagtgcccgg ttatttatga ttaaattact gaagtgtcta aaaagaacag
1141 aaggacccac cccagccata atgcagactt tcccattcct tctctttcca cccgcaactg
1201 tggggctaag aattcttaag atgtcacaga attataccat cctacctcat ctaaagtcga
1261 tccgaggctg gtccgatggt agtgggttac cagaacttaa taacattaat aactctaaag
1321 ttagtataca accccccact gctaaatttg gctataaaaa taaaattgat ctgagcacca
1381 tataaaatgg aatcctggag ggtcccctag aggcagtatc cccagtggaa agagcgtggg
1441 cctcaaggtc agacaagcct ggtttggaat ccaggctgtg tatcctttgg aaagtcattg
1501 aatccaggcc catttccttt tctctaaaat gagggtcatc atacctaagg atgttgtgag
1561 gcgtgagtga gatgattaaa gcgttccaga gagtgcgctc ttggatgata gccgttactt
1621 tttattaacc ctggctttgg tggtaaggga aacttccaga aatgcttgtg ggtatattgg
1681 atagctcaga aaatctggga aatcaaagtg gctcaatagc tgtgaggaac tgtgggtgac
1741 tttatcctca catcgtgttt cttccagaaa ttcagacgca acagaggtta ggccagtttg
1801 gtgggttcca gtgagcggtg tgttgagcct agtagagcat aggtacttgg ggttgccaaa
1861 accccagcaa gttgaggctt cacgctcagg gaaacttctg ggtcagaggt taataaccac
1921 gctccttgga gcaaggagga ggggagcctt tctgactagc tgaagtaatt gcaggtttct
1981 aactgggcct aaggtgagct gagggcttga gcccctcagc ccagcggggg tcccttttca
2041 tcccttctct gacagattgc tttgtaaact ttcttaggcc ttccccccac ccctttgccc
2101 cagtgcttta agcccttctt tgtcttcttg ctgtttcttt tattcctcag gcctgcgggg
2161 cgggggcggg gtggcgccca ggacgactcc ccgggctcag cttggctgcc tgcctccttc
2221 tgtaagtgct ttttttttct tcacctggga ccctctagag gttggaaaga gaagagaggc
2281 tgggagcgga tggaaagcat gactgcatct ggagcccctg gggggagtgg ggaagaggga
2341 gtggaaggac agtggctgag gggcttcctg ttgcagcctt cagctggact cagggttggg
2401 gtcactggag gaggaggtgg cttcctgccc cattgttctg gactgcagtg tttcttggga
2461 atacttactg tatgtggatt ttcagtaacc aacttggaaa gctgtatttg ttcccatgat
2521 tcagcaaaca atgagtacct actgtgtgta gaagcagcag gacagcctgt catcactggg
2581 aaagaggcca gaagagccgt ttggccaggg tctccaattt aggctttcaa cattatctct
2641 aaagaaggtt atacattatg tcggctccac tggctgatgg gatcaaagac cctccttgta
2701 tatccttaaa cctgtactct attaccaggc cactgtgcct gtggagcact gtaagttcct
2761 accttttaat aaattttata attatcttgt gagcaaaaaa aaaaaaaaaa
//