LOCUS BC068513 3597 bp mRNA linear HUM 21-JUL-2005 DEFINITION Homo sapiens Rho guanine nucleotide exchange factor (GEF) 3, mRNA (cDNA clone IMAGE:5264163), partial cds. ACCESSION BC068513 VERSION BC068513.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3597) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3597) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: k Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 9506400. FEATURES Location/Qualifiers source 1..3597 /db_xref="H-InvDB:HIT000263070" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:5264163" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene <1..3597 /gene="ARHGEF3" /gene_synonym="DKFZP434F2429" /gene_synonym="GEF3" /gene_synonym="STA3" /gene_synonym="XPLN" /db_xref="GeneID:50650" CDS <1..1732 /gene="ARHGEF3" /gene_synonym="DKFZP434F2429" /gene_synonym="GEF3" /gene_synonym="STA3" /gene_synonym="XPLN" /codon_start=2 /product="ARHGEF3 protein" /protein_id="AAH68513.1" /db_xref="GeneID:50650" /translation="VESCPARSRLSVSVSPPPPGIVELGPPFAWEFCSRLGSAVTSQR AGPAAAMVAKDYPFYLTVKRANCSLELPPASGPAKDAEEPSNKRVKPLSRVTSLANLI PPVKATPLKRFSQTLQRSISFRSESRPDILAPRPWSRNAAPSSTKRRDSKLWSETFDV CVNQMLTSKEIKRQEAIFELSQGEEDLIEDLKLAKKAYHDPMLKLSIMTEQELNQIFG TLDSLIPLHEELLSQLRDVRKPDGSTEHVGPILVGWLPCLSSYDSYCSNQVAAKALLD HKKQDHRVQDFLQRCLESPFSRKLDLWNFLDIPRSRLVKYPLLLREILRHTPNDNPDQ QHLEEAINIIQGIVAEINTKTGESECRYYKERLLYLEEGQKDSLIDSSRVVCCHGELK NNRGVKLHVFLFQEVLVITRAVTHNEQLCYQLYRQPIPVKDLLLEDLQDGEVRLGGSL RGAFSNNERIKNFFRVSFKNGSQSQTHSLQANDTFNKQQWLNCIRQAKETVLCAAGQA GVLDSEGSFLNPTTGSRELQGETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDSSC GNSRHGESNV" BASE COUNT 1046 a 798 c 831 g 922 t ORIGIN 1 agtcgagtcc tgcccggcta gaagccggct gtcggtctcc gtgtcgccgc cgccgcccgg 61 catcgtggag ctggggcccc cttttgcctg ggagttttgt agtcgcctag ggtcagcggt 121 gacatcccaa agggcaggcc cggcagccgc catggtggcc aaggattacc ccttctacct 181 cacggtcaag agagcgaact gcagcctgga gctacctccg gccagcggtc cggccaagga 241 cgctgaggag cctagtaata aacgggtcaa acccctttcc cgagtcacgt cgctagcaaa 301 cctcatcccg cccgtgaagg ccacgccatt aaagcgcttc agtcaaaccc tgcagcgctc 361 cattagcttc cgcagtgaga gccgccctga catcctcgcc ccccgaccct ggtccagaaa 421 tgccgccccc tcgagcacga aacggagaga tagcaagctg tggagtgaga ccttcgatgt 481 gtgcgtcaat cagatgctta catccaagga aatcaaacgt caggaggcga tctttgagct 541 ttcccaagga gaagaagact tgatagaaga cttgaaatta gcaaaaaagg cctatcatga 601 ccccatgctg aaactctcca taatgacaga acaagagttg aatcaaattt ttggaacact 661 ggactctcta attcctctac atgaagagct ccttagtcag cttcgagatg ttaggaagcc 721 tgatggctcg actgaacatg ttggtcccat cctcgtgggc tggctccctt gcctcagctc 781 ctatgatagc tactgcagca atcaagtagc cgccaaagct ctgctggacc acaaaaagca 841 agatcaccga gtccaggatt tcctacagcg atgtttagaa tcccccttta gccgcaaact 901 agatctctgg aatttcctcg atattccaag aagccgcctg gtaaaatacc ctctgcttct 961 ccgagaaatc ttgaggcaca caccaaatga taatccagat cagcagcact tggaagaagc 1021 tataaatatc attcagggaa ttgtggcaga aatcaacacc aagactggtg aatctgaatg 1081 ccgctattat aaagagcggc ttctttactt ggaagaaggc cagaaagact ccctgatcga 1141 cagctctcga gtcgtgtgtt gtcatggtga actgaagaac aatcggggcg tgaaactgca 1201 tgttttcctg ttccaagaag tgcttgtgat cactcgagcc gtcacccaca atgagcagct 1261 ttgctaccag ctgtaccgtc agccaatccc cgtgaaagac ctcctgctgg aagacctcca 1321 ggatggagaa gtgaggctgg gtggctccct gcgaggggca ttcagcaaca atgagagaat 1381 taaaaacttc ttcagagtca gtttcaaaaa tggatcccaa agtcagaccc actcgctaca 1441 agccaatgac actttcaaca aacagcagtg gcttaactgt attcgtcaag ccaaagaaac 1501 agttttgtgt gctgccgggc aagctggggt gcttgactcc gagggatcgt tcctaaatcc 1561 caccaccggg agcagagagc tacagggaga aacaaaactt gagcagatgg accaatcgga 1621 cagtgagtca gactgtagta tggacacgag tgaggtcagc ctcgactgtg agcgcatgga 1681 acagacagac tcttcctgtg ggaacagcag gcatggtgaa agtaacgtct gacagaagca 1741 tgtgcacttc gggaagcagg cctgcatctt acctgtacag tatttgcatt ccacagatgg 1801 aacggtttgg agaagcactt tttcatactt ttgtgaaagt atacatgttg gcccagtctc 1861 tcgtatctgt acctttgtcc ctagtactgt aactgccaat ctgtctgtgt aagctggaat 1921 ctgtggcaac tattaccctg tgttgtattt cccaagtgtc tggatggatg gagaggtact 1981 caaacaagtt actttcagtt gtcctgctgg attttaaaaa aatagaaaaa gaatctcaaa 2041 actactgttt tacatagatt gtttgaagag tccttcctct tgtgcttctg taccactttc 2101 ccagctctta gatgtggtag ctaaaggcac ggaatttaga cggccttgta aatagggcat 2161 gaggaactca tctgtgtatt gggatggtat tagagagaga atcaggaaag accaactcat 2221 gaagtgaact tggtttgatc ttactcaact agaaagcttg aaaacatccc tggggattct 2281 gaaggcttaa ttttgcaaag gaggatgcat tgtctgaact ttgcaacttc atccagtgca 2341 agtttgatgc aagaatgtat taggacataa aatagaggct gaccttaaaa gggccaggac 2401 agaagcggct gccagctctg aatctttaac tgaaatgcac atggcaccag gaggtgtctc 2461 tcatagttgg ttgctagcct aaaacatcag aatagaaccc aaagggctta ggaaggcctg 2521 ccaggataac aagaaggccc tgtattcatt gtgtttcatc tgcctaggcc tactcattat 2581 tttagagaat gaatgaagca acaaggaaga gagaccatga ctctatcgat gacactgttt 2641 atagaaacac aggagaggaa gaatttggaa tgaaaagcac ttcgtcagaa ccttctgtgg 2701 gagccattga gagaaaagca tggtccagtg ccttctgaga aaggccagag ctttgggctt 2761 tcctgctctg cttttgggtc gtcaatttgc catctctggt tctgtgctat aatcagaatt 2821 gtaattatgt tctccagagg ccaatttcat taactctgat taattagaat cagctagcca 2881 gattagtaac ctctttgtcc agccttgatt tacagtgcag ggtaaagtgc agaccttaaa 2941 aacagctaag tacctagaag agctccctgc aagtgtaaat attaaggatg acctgtgcaa 3001 aattataccc acaccagcac tagtggtaat tattctaaat tattgccaaa aagttttttt 3061 taatctgtct ttcaagttta cagaaaagaa agcagtaaat gcattgatgt cattttatta 3121 tgtacatata tcatgtgcat tcaagctgtg tgacaagata tatcaatata aaaacaaggt 3181 atatacttta ttattttttg aaaacaagga tattgtgatc aattttaccc tgtaaaacat 3241 atttctgtat ttataggtct taaacatgat gaattttttc tattacaagt ttatttaaaa 3301 ctgctttctc aagtcgttat tgatacagca agtgaacctg ctgcagacag aagcagagga 3361 aagccaagaa cagcctttac tggtgaagaa aagaatgaat gattctttgt aggcgccatc 3421 agccactttt agaagccatc agccagtgtg ttgggaaaag aggtttgtca agtgttggcc 3481 tatgggaagg tggtcaatga atgttttgat gaaatgaatg tttttgtata atggccttaa 3541 acttttctgg aagtatttca aataaattac attattaagc caaaaaaaaa aaaaaaa //