LOCUS BC067271 3282 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 544, mRNA (cDNA clone MGC:75037
IMAGE:6199648), complete cds.
ACCESSION BC067271
VERSION BC067271.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3282)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3282)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-MAR-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 141 Row: g Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7656870.
FEATURES Location/Qualifiers
source 1..3282
/db_xref="H-InvDB:HIT000262516"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:75037 IMAGE:6199648"
/tissue_type="Peripheral Nervous System, sympathetic
trunk"
/clone_lib="Lupski_sympathetic_trunk"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3282
/gene="ZNF544"
/db_xref="GeneID:27300"
/db_xref="HGNC:HGNC:16759"
CDS 226..2373
/gene="ZNF544"
/codon_start=1
/product="zinc finger protein 544"
/protein_id="AAH67271.1"
/db_xref="GeneID:27300"
/db_xref="HGNC:HGNC:16759"
/translation="MEARSMLVPPQASVCFEDVAMAFTQEEWEQLDLAQRTLYREVTL
ETWEHIVSLGLFLSKSDVISQLEQEEDLCRAEQEAPRDWKATLEENRLNSEKDRAREE
LSHHVEVYRSGPEEPPSLVLGKVQDQSNQLREHQENSLRFMVLTSERLFAQREHCELE
LGGGYSLPSTLSLLPTTLPTSTGFPKPNSQVKELKQNSAFINHEKNGADGKHCESHQC
ARAFCQSIYLSKLGNVETGKKNPYEYIVSGDSLNYGSSLCFHGRTFSVKKSDDCKDYG
NLFSHSVSLNEQKPVHFGKSQYECDECRETCSESLCLVQTERSGPGETPFRCEERCAA
FPMASSFSDCNIIQTTEKPSVCNQCGKSFSCCKLIHQRTHTGEKPFECTQCGKSFSQS
YDLVIHQRTHTGEKPYECDLCGKSFTQRSKLITHQRIHTGEKPYQCIECRKSFRWNSN
LIVHQRIHTGEKPYECTHCGKSFSQSYELVTHKRTHTGEKPFKCTQCGKSFSQKYDLV
VHQRTHTGEKPYECNLCGKSFSQSSKLITHQRIHTGEKPYQCIECGKSFRWNSNLVIH
QRIHTGEKPYDCTHCGKSFSQSYQLVAHKRTHTGEKPYECNECGKAFNRSTQLIRHLQ
IHTGEKPYKCNQCNKAFARSSYLVMHQRTHTGEKPFECSQCGKAFSGSSNLLSHHRIH
SGEKPYECSDCGKSFRQQSQLVVHRRTHTGEKP"
BASE COUNT 988 a 723 c 801 g 770 t
ORIGIN
1 gccaagagcc tcctggcaca gcggcaccag gcaggtgacg cctattggac cccagaggtc
61 atcccagctc cagacgtgga cacattttct tccaatgatg tctacggatg aggaaactga
121 ggcctggaga ggttaaagag acccgttcag agtcctacag tggcagactg gtcttctgag
181 gacctctgcc ctctacacag cggcctcttc aggtgcaggg aggaaatgga agcacgttct
241 atgctggttc caccccaggc atctgtgtgc ttcgaggatg tggctatggc attcacacag
301 gaggagtggg aacagctgga cctggcccag aggacactgt accgagaggt gacactggag
361 acctgggagc atattgtctc cctggggctt ttcctttcca aatctgatgt gatctctcag
421 ctggagcaag aagaggacct gtgcagggca gagcaggagg ccccccgaga ctggaaagct
481 acccttgagg agaataggtt gaattctgaa aaagatcgag ctagggaaga actatcccac
541 cacgtggaag tgtacaggag tggaccggag gagccaccct ctttggtatt aggaaaagtg
601 caagatcaga gcaaccagtt aagggaacac caggagaact ccttgaggtt catggtactc
661 acctcagaga gactgtttgc tcaaagggaa cattgtgagc ttgaacttgg gggaggttat
721 tctctacctt ctactttaag ccttctacct acaacattac ctacaagtac aggtttccct
781 aagcccaact cacaagttaa agagttgaaa caaaattcag ctttcattaa tcatgagaaa
841 aatggagcag atgggaagca ctgtgagagt catcagtgtg ctagagcttt ctgtcagagt
901 atttacttga gtaaacttgg aaacgttgaa acaggaaaga aaaaccctta tgaatatatt
961 gtcagtggtg actctctcaa ctatggttcc tccctttgtt ttcatggtag aactttttca
1021 gtgaagaaaa gtgatgactg taaggattat ggaaacctct tcagtcacag tgtgtctctg
1081 aatgaacaga agccagtgca ttttgggaaa agtcagtatg agtgtgatga gtgcagggaa
1141 acctgttctg agagtctgtg ccttgtacaa acagaaagaa gtggccctgg agagaccccc
1201 ttcagatgtg aggaacgctg tgctgccttc cccatggcct catctttttc tgactgtaac
1261 atcattcaga ctacagagaa gccatctgtg tgtaatcagt gtggaaaatc tttcagctgt
1321 tgtaagctca tacaccagag aacacacact ggagaaaagc ccttcgaatg tactcagtgt
1381 gggaaatctt ttagccagag ctatgacctt gtcatacatc agaggacaca cactggagag
1441 aagccctatg agtgtgacct gtgtgggaaa tccttcaccc agagatccaa acttattaca
1501 catcagcgaa ttcacactgg agaaaaaccg tatcagtgta ttgaatgcag aaaatccttc
1561 aggtggaact ctaacctcat tgtacatcag agaattcata ctggagagaa accgtatgag
1621 tgcactcact gtggaaagtc cttcagccaa agctatgagt tagttacaca taaaagaacg
1681 cacactggag aaaaaccctt caaatgtact cagtgtggga aatctttcag ccagaagtat
1741 gaccttgttg tacatcagag gacacacact ggagagaagc cctatgagtg caacctgtgt
1801 gggaaatcct tctcccagag ttccaaactt attacgcatc agcgaattca cactggagaa
1861 aaaccgtatc agtgtattga atgtgggaaa tccttcagat ggaactctaa cctcgtcata
1921 catcagagaa ttcatactgg agagaaaccg tacgattgca ctcactgtgg aaagtccttc
1981 agccaaagct atcagttagt tgcacataaa agaactcaca ctggagaaaa gccctatgaa
2041 tgtaacgagt gtggaaaagc cttcaatcga agcactcagc tcatcaggca tctgcaaatt
2101 cacactgggg agaagccgta caaatgcaat cagtgcaata aagcctttgc aaggagctcc
2161 taccttgtga tgcatcagag aactcacact ggtgagaaac cttttgagtg tagtcagtgt
2221 gggaaagcct tttcagggag ctctaacctt ctttcccatc acagaattca ttctggagag
2281 aaaccctatg aatgtagtga ctgtgggaaa tccttccggc agcaatctca acttgtagtg
2341 catcggcgga cacatactgg agagaaacct taggagtgca gtcattgtgg gaaagctttc
2401 atccagaggt ctcccctcat catgcaccag aggacgcatg tcggtgggaa gagctatcag
2461 tgtgacgtgt attaagccag cggttgtgac tcattgaaca tcagaggaca tatcctggag
2521 aaaagcccta cgaatgcatt gattgtggga aagccttcaa tgatcgctca acccttagta
2581 aacacgagag gacacacact ggaggcaaac cctatgaatg tgaccattgc gagaaagcct
2641 ttagccaacg gtgtcaactt actaggcagc agagaattca tactggagag aagccctgtg
2701 aatgttaaca aatgtggaaa agcttccagt tatgatactt tccttattca acatgagaaa
2761 gctcatgggc aagaaactct atgaataacc aagatggagc cgggtgcagt tgccaacact
2821 tgtaatccca gcagtttgcg aggccgaggc aggtggatca cttgagccca ggagtttgaa
2881 accagcctgg gtaacatggc aaaatcctgt ctttacaaaa aatacaaaaa ttagcctagc
2941 atggtggcgc atacctgtgg tcctagctac tcaggaggct gaggtgggag gatcacttga
3001 gcttgggagg cggtggttgc agtgagctgt gatcatgcca tcacaccgct gccttgtgag
3061 agattgagac actctaaata aataataacc aagatgggaa atttccctgc cagaccttgt
3121 ttactagaaa tcaggtggcc aaaacatgac tctcagagtg gggcttcatg accatgtgca
3181 tcagaattgc ctggagtgtg cactgaaact gtgtattacc aagctcactc tagccaacta
3241 aataaaaatc tctggcagta aaaaaaaaaa aaaaaaaaaa aa
//