LOCUS BC066295 1250 bp mRNA linear HUM 11-APR-2007 DEFINITION Homo sapiens caprin family member 2, mRNA (cDNA clone IMAGE:4821382), complete cds. ACCESSION BC066295 VERSION BC066295.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1250) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1250) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-FEB-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 167 Row: e Column: 15 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..1250 /db_xref="H-InvDB:HIT000262186" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4821382" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..1250 /gene="CAPRIN2" /gene_synonym="caprin-2" /gene_synonym="EEG-1" /gene_synonym="EEG1" /db_xref="GeneID:65981" /db_xref="HGNC:HGNC:21259" /db_xref="MIM:610375" CDS 411..887 /gene="CAPRIN2" /gene_synonym="caprin-2" /gene_synonym="EEG-1" /gene_synonym="EEG1" /codon_start=1 /product="CAPRIN2 protein" /protein_id="AAH66295.1" /db_xref="GeneID:65981" /db_xref="HGNC:HGNC:21259" /db_xref="MIM:610375" /translation="MTPVDVPVTNPAATILPVHVYPLPQQMRVAFSAARTSNLAPGTL DQPIVFDLLLNNLGETFDLQLGRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKNEEVL VSAYANDGAPDHETASNHAILQLFQGDQIWLRLHRGAIYGSSWKYSTFSGYLLYQD" BASE COUNT 357 a 258 c 274 g 361 t ORIGIN 1 tttcccagac ctactcagcc atttgtcaat agccggggat ctgttagagg atgtactcgt 61 ggtgggagat ttataaccaa ttcctatcgg tcccctggtg gttataaagg ttttgatact 121 tatagaggac tcccttcaat ttccaatgga aattatagcc agctgcagtt ccaagctaga 181 gagtattctg gagcacctta ttcccaaagg gataatttcc agcagtgtta taagcgagga 241 gggacatctg gtggtccacg agcaaattcg agagctaact gcttcattat gagaaactca 301 ctgttgctaa taaaacagca gggtggagtg attcttctca ggtgagcagc ccagaaagag 361 acaacgaaac ctttaacagt ggtgactctg gacaaggaga ctcccgtagc atgacccctg 421 tggatgtgcc agtgacaaat ccagcagcca ccatactgcc agtacacgtc taccctctgc 481 ctcagcagat gcgagttgcc ttctcagcag ccagaacctc taatctggcc cctggaactt 541 tagaccaacc tattgtgttt gatcttcttc tgaacaactt aggagaaact tttgatcttc 601 agcttggtag atttaattgc ccagtgaatg gcacttacgt tttcattttt cacatgctaa 661 agctggcagt gaatgtgcca ctgtatgtca acctcatgaa gaatgaagag gtcttggtat 721 cagcctatgc caatgatggt gctccagacc atgaaactgc tagcaatcat gcaattcttc 781 agctcttcca gggagaccag atatggttac gtctgcacag gggagcaatt tatggaagta 841 gctggaaata ttctacgttt tcaggctatc ttctttatca agattgaaag tcagtacagt 901 attgacaata aaaggatggt gttctaatta gtgggattga aggaaaagta gtctttgcca 961 tcatgactga ttggtttagg aaaatgtttt tgttcctaga gggaggaggt ccttactttt 1021 ttgttttcct tcctgaggtg aaaaatcaag ctgaatgaca attagcacta atctggcact 1081 ttataaattg tgatgtagcc tcgctagtca agctgtgaat gtatattgtt tgcacttaat 1141 ccttaactgt attaacgttc agcttactaa actgactgcc tcaagtccag gcaagttaca 1201 atgccttgtt gtgcctcaat aaaaaagtta catgcaaaaa aaaaaaaaaa //