LOCUS BC065571 1529 bp mRNA linear HUM 23-JUN-2006 DEFINITION Homo sapiens Y box binding protein 1, mRNA (cDNA clone MGC:75111 IMAGE:6171221), complete cds. ACCESSION BC065571 VERSION BC065571.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1529) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1529) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-JAN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 140 Row: p Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 34098945. FEATURES Location/Qualifiers source 1..1529 /db_xref="H-InvDB:HIT000261977" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:75111 IMAGE:6171221" /tissue_type="Eye, retinoblastoma" /clone_lib="NIH_MGC_67" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1529 /gene="YBX1" /gene_synonym="BP-8" /gene_synonym="CSDA2" /gene_synonym="CSDB" /gene_synonym="DBPB" /gene_synonym="MDR-NF1" /gene_synonym="NSEP-1" /gene_synonym="YB-1" /gene_synonym="YB1" /db_xref="GeneID:4904" /db_xref="HGNC:HGNC:8014" /db_xref="MIM:154030" CDS 139..1113 /gene="YBX1" /gene_synonym="BP-8" /gene_synonym="CSDA2" /gene_synonym="CSDB" /gene_synonym="DBPB" /gene_synonym="MDR-NF1" /gene_synonym="NSEP-1" /gene_synonym="YB-1" /gene_synonym="YB1" /codon_start=1 /product="Y box binding protein 1" /protein_id="AAH65571.1" /db_xref="GeneID:4904" /db_xref="HGNC:HGNC:8014" /db_xref="MIM:154030" /translation="MSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGPGGLTS AAPAGGDKKVIATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRS VGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGSKYAADRNHYRRYPRRRGPPRNYQQ NYQNSESGEKNEGSESAPEGQAQQRRPYRRRRFPPYYMRRPYGRRPQYSNPPVQGEVM EGADNQGAGEQGRPVRQNMYRGYRPRFRRGPPRQRQPREDGNEEDKENQGDETQGQQP PQRRYRRNFNYRRRRPENPKPQDGKETKAADPPAENSSAPEAEQGGAE" BASE COUNT 457 a 389 c 391 g 292 t ORIGIN 1 gtcgcccacg cgtccggagc ggagagcgga ccccagagag ccctgagcag ccccaccgcc 61 gccgccggcc tagttaccat cacaccccgg gaggagccgc agctgccgca gccggcccca 121 gtcaccatca ccgcaaccat gagcagcgag gccgagaccc agcagccgcc cgccgccccc 181 cccgccgccc ccgccctcag cgccgccgac accaagcccg gcactacggg cagcggcgca 241 gggagcggtg gcccgggcgg cctcacatcg gcggcgcctg ccggcgggga caagaaggtc 301 atcgcaacga aggttttggg aacagtaaaa tggttcaatg taaggaacgg atatggtttc 361 atcaacagga atgacaccaa ggaagatgta tttgtacacc agactgccat aaagaagaat 421 aaccccagga agtaccttcg cagtgtagga gatggagaga ctgtggagtt tgatgttgtt 481 gaaggagaaa agggtgcgga ggcagcaaat gttacaggtc ctggtggtgt tccagttcaa 541 ggcagtaaat atgcagcaga ccgtaaccat tatagacgct atccacgtcg taggggtcct 601 ccacgcaatt accagcaaaa ttaccagaat agtgagagtg gggaaaagaa cgagggatcg 661 gagagtgctc ccgaaggcca ggcccaacaa cgccggccct accgcaggcg aaggttccca 721 ccttactaca tgcggagacc ctatgggcgt cgaccacagt attccaaccc tcctgtgcag 781 ggagaagtga tggagggtgc tgacaaccag ggtgcaggag aacaaggtag accagtgagg 841 cagaatatgt atcggggata tagaccacga ttccgcaggg gccctcctcg ccaaagacag 901 cctagagagg acggcaatga agaagataaa gaaaatcaag gagatgagac ccaaggtcag 961 cagccacctc aacgtcggta ccgccgcaac ttcaattacc gacgcagacg cccagaaaac 1021 cctaaaccac aagatggcaa agagacaaaa gcagccgatc caccagctga gaattcgtcc 1081 gctcccgagg ctgagcaggg cggggctgag taaatgccgg cttaccatct ctaccatcat 1141 ccggtttagt catccaacaa gaagaaatat gaaattccag caataagaaa tgaacaaaag 1201 attggagctg aagacctaaa gtgcttgctt tttgcccgtt gaccagataa atagaactat 1261 ctgcattatc tatgcagcat ggggttttta ttatttttac ctaaagacgt ctctttttgg 1321 taataacaaa cgtgtttttt aaaaaagcct ggtttttctc aatacgcctt taaaggtttt 1381 taaattgttt catatctggt caagttgaga tttttaagaa cttcattttt aatttgtaat 1441 aaaagtttac aacttgattt tttcaaaaaa gtcaacaaac tgcaagcacc tgttaataaa 1501 ggtcttaaat aataaaaaaa aaaaaaaaa //