LOCUS BC064499 4891 bp mRNA linear HUM 06-JAN-2004 DEFINITION Homo sapiens sperm specific antigen 2, mRNA (cDNA clone MGC:71359 IMAGE:6251533), complete cds. ACCESSION BC064499 VERSION BC064499.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4891) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4891) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 50 Row: l Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: GenomeScan gene prediction. FEATURES Location/Qualifiers source 1..4891 /db_xref="H-InvDB:HIT000261419" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71359 IMAGE:6251533" /tissue_type="Pancreas, ductal carcinoma" /clone_lib="NIH_MGC_110" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..4891 /gene="SSFA2" /gene_synonym="CS-1" /gene_synonym="CS1" /gene_synonym="KIAA1927" /gene_synonym="KRAP" /gene_synonym="SPAG13" /db_xref="GeneID:6744" /db_xref="MIM:118990" CDS 121..3900 /gene="SSFA2" /gene_synonym="CS-1" /gene_synonym="CS1" /gene_synonym="KIAA1927" /gene_synonym="KRAP" /gene_synonym="SPAG13" /codon_start=1 /product="SSFA2 protein" /protein_id="AAH64499.1" /db_xref="GeneID:6744" /db_xref="MIM:118990" /translation="MDRPLSSSAEAEEELEWQVASRRRKAWAKCRSSWQASETEDLST EATTQDEEEDEEEDLPGAQLPAAGGRGNVPNEKIAIWLKDCRTPLGASLDEQSSSTLK GVLVRNGGSFEDDLSLGAEANHLHESDAQIENCNNILAKERRLQFHQKGRSMNSTGSG KSSGTVSSVSELLELYEEDPEEILYNLGFGRDEPDIASKIPSRFFNSSSFAKGIDIKV FLSAQMQRMEVENPNYALTSRFRQIEVLTTVANAFSSLYSQVSGTPLQRIGSMSSVTS NKETDPPPPLTRSNTANRLMKTLSKLNLCVDKTEKGESSSPSPSAEKGKILNVSVIEE SGNKNDQKSQKIMKKKESSSMLATVKEEVSGSSAAVTENADSDRISDEANSNFNQGTE NEQSKETQSHESKLGEESGIVESKLDSDFNISSHSELENSSELKSVHISTPEKEPCAP LTIPSIRNIMTQQKDSFEMEEVQSTEGEAPHVPATYQLGLTKSKRDHLLRTASQHSDS SGFAEDSTDCLSLNHLQVQESLQAMGSSADSCDSETTVTSLGEDLATPTAQDQPYFNE SEEESLVPLQKGLEKAAAVADKRKSGSQDFPQCNTIENTGTKQSTCSPGDHIIEITEV EEDLFPAETVELLREASAESDVGKSSESEFTQYTTHHILKSLASIEAKCSDMSSENTT GPPSSMDRVNTALQRAQMKVCSLSNQRMGRSLLKSKDLLKQRYLFAKAGYPLRRSQSL PTTLLSPVRVVSSVNVRLSPGKETRCSPPSFTYKYTPEEEQELEKRVMEHDGQSLVKS TIFISPSSVKKEEAPQSEAPRVEECHHGRTPTCSRLAPPPMSQSTCSLHSIHSEWQER PLCEHTRTLSTHSVPNISGATCSAFASPFGCPYSHRHATYPYRVCSVNPPSAIEMQLR RVLHDIRNSLQNLSQYPMMRGPDPAAAPYSTQKSSVLPLYENTFQELQVMRRSLNLFR TQMMDLELAMLRQQTMVYHHMTEEERFEVDQLQGLRNSVRMELQDLELQLEERLLGLE EQLRAVRMPSPFRSSALMGMCGSRSADNLSCPSPLNVMEPVTELMQEQSYLKSELGLG LGEMGFEIPPGESSESVFSQATSESSSVCSGPSHANRRTGVPSTASVGKSKTPLVARK KVFRASVALTPTAPSRTGSVQTPPDLESSEEVDAAEGAPEVVGPKSEVEEGHGKLPSM PAAEEMHKNVEQDELQQVIREIKESIVGEIRREIVSGLLAAVSSSKASNSKQDYH" BASE COUNT 1477 a 980 c 1122 g 1312 t ORIGIN 1 cccgcttcag ctccccgggg ccccctgccc ggccgggcgc tgacagcaag ggcgggggtc 61 cctgccgccg ccttgtctcg cgcagggtcc ggctggggta gcggagcccc cagtgcggcc 121 atggaccggc ccctgtcgtc gtcggcggag gcggaggagg aactggagtg gcaagtggcg 181 agtcgcagga ggaaggcctg ggccaagtgc cgcagctcct ggcaagcgtc ggagacggag 241 gatctgtcca cagaagcgac gacgcaggac gaggaggagg acgaggagga ggacctcccc 301 ggcgcgcagc tgccggcagc ggggggaaga ggaaacgtgc ccaacgagaa gatcgcgata 361 tggctcaagg actgccgtac acctttggga gcctcactgg atgaacaaag cagtagtaca 421 ctcaagggtg tgcttgtgag aaatggagga agttttgaag atgatttgtc attgggagct 481 gaagccaacc acctccatga aagtgatgct caaattgaaa actgcaataa tatcttggcc 541 aaagagagaa gattacagtt tcatcagaaa gggagaagta tgaattccac tggatctggg 601 aaaagtagtg ggacagtttc aagtgtttca gaattgttgg aactttatga ggaagatcct 661 gaagaaattc tttataatct tggatttgga cgtgatgaac cagatattgc ttctaaaatt 721 ccttccagat tttttaattc atcatccttt gccaaaggga tagatattaa agtatttttg 781 agtgctcaga tgcaacggat ggaagtagaa aacccaaatt atgctttaac aagccgtttt 841 cgtcaaattg aagtgcttac tactgtggcc aatgcgtttt cttctttata ttctcaagtc 901 tccgggacgc ccctgcagag aattggaagt atgtcctcag tgacctctaa caaggagaca 961 gacccacctc cacctttaac tcgaagtaac actgcaaatc gtttaatgaa aacactctca 1021 aaactgaatt tatgtgttga taaaacagag aaaggagaaa gtagtagtcc ttctccatca 1081 gctgaaaaag gaaagattct aaatgtttca gtgattgaag aaagtggcaa taaaaacgat 1141 caaaagtctc aaaaaattat gaagaagaaa gagtcatctt ctatgttggc tacagttaaa 1201 gaagaagtct ctggtagttc agcagctgtt acggagaatg ctgatagtga tagaatttct 1261 gatgaagcaa atagtaattt taaccaagga actgaaaatg aacaaagtaa agaaactcaa 1321 agtcatgaga gtaaactggg tgaggaatct ggtattgtag aatccaaatt agatagtgat 1381 ttcaacatat ccagccacag tgagctggaa aatagcagtg agctgaaaag tgtccatata 1441 tccacacctg aaaaagagcc ttgtgcacca ctgacaatac catccataag aaatataatg 1501 acacagcaga aggactcctt cgaaatggaa gaggttcaaa gtacggaggg agaagctcct 1561 catgttccag ccacttacca gctaggtctt acgaagtcga aaagagatca tctgttacgt 1621 actgcaagtc agcattccga tagcagtggt tttgctgaag attctacaga ctgcctatcc 1681 cttaatcatc ttcaggttca ggagtccttg caggctatgg ggagtagtgc tgatagttgt 1741 gacagtgaga caacagttac gtcacttggt gaagaccttg ccacaccaac agcacaagac 1801 cagccttatt ttaatgaatc agaggaggag tctcttgtcc ctcttcagaa gggactagag 1861 aaggcagcag cagttgcaga caaaagaaaa tcaggtagcc aggatttccc tcagtgcaac 1921 accattgaga atacaggaac taaacagtcc acctgtagtc caggggatca tatcattgaa 1981 attactgaag tggaagagga tttgtttcca gcagagacag tagagctact gagggaagca 2041 agtgctgaaa gtgatgtggg taaaagcagt gaaagtgaat ttactcagta taccacacac 2101 catattctga aatcattggc ttctattgaa gctaaatgca gtgatatgag ctctgaaaat 2161 acaactgggc ctccctcttc catggacaga gttaatacag ctttgcaaag agctcaaatg 2221 aaggtttgca gtctgtctaa tcaaaggatg gggcgtagcc tgctaaaatc aaaagatttg 2281 ttaaaacaaa ggtacttatt tgcaaaagct ggctatcctc taagaaggtc tcagtcttta 2341 ccaaccacct tattgagccc agtaagggtt gtgtcctctg tcaatgttcg attatctcca 2401 ggaaaagaga ccagatgcag cccaccttcc ttcacctata agtacacacc tgaagaggag 2461 caggaattgg aaaagcgggt gatggaacat gatggtcagt ctttagttaa atcgaccatt 2521 ttcatctctc catcatctgt gaagaaagaa gaagcccccc agagtgaggc gccgcgggtg 2581 gaggaatgcc atcatggaag gactcctacc tgttcacggc ttgctccacc accaatgtct 2641 cagtctacct gttcccttca ttccatccac tctgagtggc aagaaaggcc cctgtgtgag 2701 cacacaagaa ctctgagcac tcacagtgtt cccaacatat caggggctac ttgtagtgcc 2761 ttcgcttccc ctttcgggtg tccttactca catagacatg ccacctaccc ttaccgagtg 2821 tgctctgtga atcctccttc agccatagaa atgcagttgc gaagagtatt acatgatatt 2881 agaaactcac tgcagaatct ttcacagtac cctatgatga gaggacctga tcctgctgct 2941 gctccatata gtactcagaa atcatctgtt ctacctcttt atgaaaatac ttttcaggag 3001 ctccaggtaa tgaggcggag cctgaatttg tttagaacac aaatgatgga tttagaattg 3061 gcaatgctgc gtcagcaaac catggtttat catcatatga ctgaggagga gaggtttgaa 3121 gttgatcagc tccagggttt gagaaattca gtccgaatgg aacttcagga cctggaactg 3181 cagctggagg agcgcctgct gggcctggag gagcagcttc gtgctgtgcg catgccttca 3241 cccttccgct cctccgcact catgggaatg tgtggcagta gaagcgctga taacttgtca 3301 tgcccttctc cattgaatgt aatggaacca gtcactgaac tgatgcagga gcagtcatac 3361 ctgaagtctg aattgggcct gggacttgga gaaatgggat ttgaaattcc tcctggagaa 3421 agctcagaat ctgttttttc ccaagcaaca tcagaatcat cttctgtatg ttctggtccc 3481 tctcatgcta acagaagaac tggagtacct tctactgcct cagtgggcaa atccaaaacc 3541 ccattagtgg caaggaagaa agtgttccga gcatcggtgg ctctaacgcc aacagctcct 3601 tctagaacag gctctgtgca gacacctcca gatttggaaa gttctgagga agttgatgca 3661 gctgaaggag ccccagaagt tgtaggacct aaatctgaag tggaagaagg gcatggaaaa 3721 ctcccatcaa tgccagctgc tgaggaaatg cataaaaatg tggagcaaga tgagttgcag 3781 caagtcatac gggagattaa agagtctatt gttggggaaa tcagacggga aattgtaagt 3841 ggacttttgg cagcagtatc ttcaagtaaa gcgtctaatt ctaagcaaga ttatcattaa 3901 acagaaatta taggttggca tggatcctat tagctgtgta atactggaat tatcaatgat 3961 atgcactggt ggaggtgtta tttgtgcttt agaagatact tgctgttgag ctgggctact 4021 gtatacagtg tacaatgtgt atttcttcaa ccatatattt taaaaagacg tacatagaaa 4081 cttaggcact ttgctatttc ttttctaaac tatcaaaaac tctagcagtt tgaaaagcct 4141 aatatttatt tgtatgtcag tatttttcat ttgattccct attagaatta attttaaaac 4201 ttgaagactt ccagacttat ccaacttata aataacatat ttcttcagac taacatctta 4261 aaacactgac ctctatgagg tatttactgt gcaataactg attcattttt ttcagagctt 4321 gaagcatcca atgatttttc cctccactgc tgttaattaa tgtcacttcc aagaagaaaa 4381 actgttctgt tgtaaaaaat ataattgctc ttaattcttg gggaggttac taatagcagt 4441 aggatagaat tttatgaggt tacctacaac tacttaatgt acttacactg taagccttgt 4501 tgctttaccc aagacaaatg taattttatc attgcttatg tagtattttt cttttggaaa 4561 tgtgccttat gttaaacact atgtactttt actttttgca ttgtccagac ttctttatta 4621 gatggagatg tttctttttc tgtcttctag actaaataga gtatcatcca aataatgggg 4681 cctatgactt gaatgaatag aaatgaataa gctggtgttt gttttttcaa aatggaagta 4741 atttagattt gttctcctca tacataaaat gattttagtt cagttttaac cagtgaaaac 4801 tttgttttta tgaaaaaaaa aggaaaatgg tttcccattt ggttttatat gtgttaaata 4861 aatgtgtaaa gtaaaaaaaa aaaaaaaaaa a //