LOCUS BC063512 2027 bp mRNA linear HTC 27-OCT-2008
DEFINITION Homo sapiens chromosome 16 open reading frame 84, mRNA (cDNA clone
IMAGE:3877613), with apparent retained intron.
ACCESSION BC063512
VERSION BC063512.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2027)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2027)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: c Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61676107
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2027
/db_xref="H-InvDB:HIT000260970"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3877613"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_68"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 481 a 593 c 605 g 348 t
ORIGIN
1 ggcgtgccca tgtgtcaggt gggcgaggac tacagggagc cggcgcctga ggagccgccc
61 ccggcgccgc ggcccagccg tgagcagaag tgtgtgaagt gcaaggaagc gcagcccgtt
121 gtggtgatac gagccggaga tgccttctgc agggactgtt tcaaggcctt ctacgtccac
181 aagttcagag ccatgctggg caagaaccgg ctcatctttc caggcgagaa ggtgctcttg
241 gcgtggtctg gggggccttc gtccagctcc atggtctggc aggttcttga gggcctgagc
301 caagattctg ccaaaagact gcgctttgtg gcaggagtca tctttgttga cgaacgaact
361 cctggggtgt tgactgtagc gctgaggtca gccgcaagag agaaacccct gcccaaagga
421 aaatggccga caccccacag ctccgccagg aagcaccgcc ctgcggagcg aggcctcgaa
481 gggttttccc aggtggagat ggccctgcag cctgccctgc ctggctcctc tctgagccct
541 gactctttct gcctgggttt ttcagaggga gcagcctgtg gccagagcct agaggagaga
601 tcaaagaccc tggccgaagt gaagcccatt ctgcaagcaa ctgggttccc atggcatgtg
661 gtggccttag aggaggtgtt cagcctgcca ccgtcggtgc tttggtgctc tgcccaggag
721 ctggtgggat ccgagggggc ctacaaggcg gccgtggaca gcttcctcca gcagcagcat
781 gtgctggggg ccgggggtgg tcctggcccg actcaagggg aggaacagcc accccagccc
841 ccgctggacc cccagaacct ggcaagaccg cctgcccctg cccagactga ggctctttcc
901 caactgttct gctcagtgag gacactgact gccaaggagg agcttctgca gaccctgcgg
961 acccacctga tcctccacat ggcccgagcc cacggctact ccaaggtcat gactggggac
1021 agctgcacac gcttggctat caagctcatg accaacctgg cgctgggtcg aggggccttc
1081 ctggcctggg atacgggctt ctcggatgag cggcacgggg acgtggtggt ggtgcggccc
1141 atgcgggacc acaccctgaa ggaggtcgct ttctacaacc gcctgttctc cgttccttct
1201 gtcttcacac cagccgtcga caccaaggcc cctgaaaagg ccagcatcca ccggctgatg
1261 gaggccttca tcctcaggct gcagacccag ttcccctcca ctgtcagcac tgtgtacagg
1321 acaagtgaga agctggtgaa gggcccccgg gatggccctg ctgctggcga ctccggcccc
1381 cgctgcctcc tctgcatgtg tgccctggac gtcgacgccg ctgacagtgc cacggctttt
1441 ggggctcaga cctcctcgcg tctctcccag atgcagtcac ccatccccct gactgagacc
1501 cggacacccc cggggccctg ctgttctcca ggggtgggct gggcccagcg ctgcggccag
1561 ggggcctgca ggagggagga cccccaagcc tgcattgagg agcagctgtg ctacagctgc
1621 cgcgtgaaca tgaaggactt gccctcactg gaccccctgc cgccgtacat cctggctgag
1681 gcccagctcc gcacacagag ggcctggggc ttgcaggaga tccgcgactg tctgattgag
1741 gacagtgacg acgaggcggg ccagagctga gcgtgaggac gtgcttgccg ggacagcagg
1801 cagtggccac ctggtacacc acactggagc cggaaggcaa ggacggggga ctggcctctg
1861 attgtccatt tgtataaata aaacattttt taattaaaaa aaaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
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