LOCUS BC063511 1182 bp mRNA linear HUM 02-JAN-2004 DEFINITION Homo sapiens eukaryotic translation elongation factor 1 alpha 1, mRNA (cDNA clone IMAGE:3877674), partial cds. ACCESSION BC063511 VERSION BC063511.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1182) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1182) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 134 Row: c Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1182 /db_xref="H-InvDB:HIT000260969" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3877674" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_68" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1182 /gene="EEF1A1" /gene_synonym="EEF-1" /gene_synonym="EEF1A" /gene_synonym="eEF1A-1" /gene_synonym="EEF1A1L14" /gene_synonym="EF-Tu" /gene_synonym="EF1A" /gene_synonym="GRAF-1EF" /gene_synonym="MGC16224" /gene_synonym="PTI-1" /gene_synonym="PTI1" /db_xref="GeneID:1915" /db_xref="MIM:130590" CDS <1..875 /gene="EEF1A1" /gene_synonym="EEF-1" /gene_synonym="EEF1A" /gene_synonym="eEF1A-1" /gene_synonym="EEF1A1L14" /gene_synonym="EF-Tu" /gene_synonym="EF1A" /gene_synonym="GRAF-1EF" /gene_synonym="MGC16224" /gene_synonym="PTI-1" /gene_synonym="PTI1" /codon_start=3 /product="EEF1A1 protein" /protein_id="AAH63511.1" /db_xref="GeneID:1915" /db_xref="MIM:130590" /translation="EVSTYIKKIGYNPDTVAFVPISGWNGDNMLEPSANMPWFKGWKV TRKDGNASGTTLLEALDCILPPTRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKP GMVVTFAPVNVTTEVKSVEMHHEALSEALPGDNVGFNVKNVSVKDVRRGNVAGDSKND PPMEAAGFTAQVIILNHPGQISAGYAPVLDCHTAHIACKFAELKEKIDRRSGKKLEDG PKFLKSGDAAIVDMVPGKPMCVESFSDYPPLGRFAVRDMRQTVAVGVIKAVDKKAAGA GKVTKSAQKAQKAK" misc_feature 3..200 /gene="EEF1A1" /gene_synonym="EEF-1" /gene_synonym="EEF1A" /gene_synonym="eEF1A-1" /gene_synonym="EEF1A1L14" /gene_synonym="EF-Tu" /gene_synonym="EF1A" /gene_synonym="GRAF-1EF" /gene_synonym="MGC16224" /gene_synonym="PTI-1" /gene_synonym="PTI1" /note="GTP_EFTU; Region: Elongation factor Tu GTP binding domain. This domain contains a P-loop motif, also found in several other families such as pfam00071, pfam00025 and pfam00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains" /db_xref="CDD:pfam00009" misc_feature 264..467 /gene="EEF1A1" /gene_synonym="EEF-1" /gene_synonym="EEF1A" /gene_synonym="eEF1A-1" /gene_synonym="EEF1A1L14" /gene_synonym="EF-Tu" /gene_synonym="EF1A" /gene_synonym="GRAF-1EF" /gene_synonym="MGC16224" /gene_synonym="PTI-1" /gene_synonym="PTI1" /note="GTP_EFTU_D2; Region: Elongation factor Tu domain 2. Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to pfam03143, and in fact has weak sequence matches to this domain" /db_xref="CDD:pfam03144" misc_feature 483..782 /gene="EEF1A1" /gene_synonym="EEF-1" /gene_synonym="EEF1A" /gene_synonym="eEF1A-1" /gene_synonym="EEF1A1L14" /gene_synonym="EF-Tu" /gene_synonym="EF1A" /gene_synonym="GRAF-1EF" /gene_synonym="MGC16224" /gene_synonym="PTI-1" /gene_synonym="PTI1" /note="GTP_EFTU_D3; Region: Elongation factor Tu C-terminal domain. Elongation factor Tu consists of three structural domains, this is the third domain. This domain adopts a beta barrel structure. This the third domain is involved in binding to both charged tRNA and binding to EF-Ts pfam00889" /db_xref="CDD:pfam03143" BASE COUNT 331 a 247 c 288 g 316 t ORIGIN 1 aggaagtcag cacttacatt aagaaaattg gctacaaccc cgacacagta gcatttgtgc 61 caatttctgg ttggaatggt gacaacatgc tggagccaag tgctaacatg ccttggttca 121 agggatggaa agtcacccgt aaggatggca atgccagtgg aaccacgctg cttgaggctc 181 tggactgcat cctaccacca actcgtccaa ctgacaagcc cttgcgcctg cctctccagg 241 atgtctacaa aattggtggt attggtactg ttcctgttgg ccgagtggag actggtgttc 301 tcaaacccgg tatggtggtc acctttgctc cagtcaacgt tacaacggaa gtaaaatctg 361 tcgaaatgca ccatgaagct ttgagtgaag ctcttcctgg ggacaatgtg ggcttcaatg 421 tcaagaatgt gtctgtcaag gatgttcgtc gtggcaacgt tgctggtgac agcaaaaatg 481 acccaccaat ggaagcagct ggcttcactg ctcaggtgat tatcctgaac catccaggcc 541 aaataagcgc cggctatgcc cctgtattgg attgccacac ggctcacatt gcatgcaagt 601 ttgctgagct gaaggaaaag attgatcgcc gttctggtaa aaagctggaa gatggcccta 661 aattcttgaa gtctggtgat gctgccattg ttgatatggt tcctggcaag cccatgtgtg 721 ttgagagctt ctcagactat ccacctttgg gtcgctttgc tgttcgtgat atgagacaga 781 cagttgcggt gggtgtcatc aaagcagtgg acaagaaggc tgctggagct ggcaaggtca 841 ccaagtctgc ccagaaagct cagaaggcta aatgaatatt atccctaata cctgccaccc 901 cactcttaat cagtggtgga agaacggtct cagaactgtt tgtttcaatt ggccatttaa 961 gtttagtagt aaaagactgg ttaatgataa caatgcatcg taaaaccttc agaaggaaag 1021 gagaatgttt tgtggaccac tttggttttc ttttttgcgt gtggcagttt taagttatta 1081 gtttttaaaa tcagtacttt ttaatggaaa caacttgacc aaaaatttgt cacagaattt 1141 tgagacccat taaaaaagtt aaatgagaaa aaaaaaaaaa aa //