LOCUS BC060864 2519 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4, mRNA (cDNA clone MGC:71806 IMAGE:30341070), complete cds. ACCESSION BC060864 VERSION BC060864.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2519) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2519) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-NOV-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Stefan Hansson cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 133 Row: e Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 38348337. FEATURES Location/Qualifiers source 1..2519 /db_xref="H-InvDB:HIT000260166" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71806 IMAGE:30341070" /tissue_type="Placenta, normal" /clone_lib="NIH_MGC_147" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..2519 /gene="GALNTL4" /gene_synonym="GalNAc-T15" /gene_synonym="GALNT15" /gene_synonym="GALNT18" /gene_synonym="MGC71806" /db_xref="GeneID:374378" /db_xref="HGNC:HGNC:30488" CDS 413..2236 /gene="GALNTL4" /gene_synonym="GalNAc-T15" /gene_synonym="GALNT15" /gene_synonym="GALNT18" /gene_synonym="MGC71806" /codon_start=1 /product="UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4" /protein_id="AAH60864.1" /db_xref="GeneID:374378" /db_xref="HGNC:HGNC:30488" /translation="MVCTRKTKTLVSTCVILSGMTNIICLLYVGWVTNYIASVYVRGQ EPAPDKKLEEDKGDTLKIIERLDHLENVIKQHIQEAPAKPEEAEAEPFTDSSLFAHWG QELSPEGRRVALKQFQYYGYNAYLSDRLPLGRPLPDLRPSGCRNLSFPDSLPEVSIVF IFVNEALSVLLRSIHSAMERTPPHLLKEIILVDDNSSNEELKEKLTEYVDKVNSQKPG FIKVVRHSKQEGLIRSRVSGWRAATAPVVALFDAHVEFNVGWAEPVLTRIKENRKRII SPSFDNIKYDNFEIEEYPLAAQGFDWELWCRYLNPPKAWWKLENSTAPIRSPALIGCF IVDRQYFQEIGLLDEGMEVYGGENVELGIRVWQCGGSVEVLPCSRIAHIERAHKPYTE DLTAHVRRNALRVAEVWMDEFKSHVYMAWNIPQEDSGIDIGDITARKALRKQLQCKTF RWYLVSVYPEMRMYSDIIAYGVLQNSLKTDLCLDQGPDTENVPIMYICHGMTPQNVYY TSSQQIHVGILSPTVDDDDNRCLVDVNSRPRLTECSYAKAKRMKLHWQFSQGGPIQNR KSKRCLELQENSDLEFGFQLVLQKCSGQHWSITNVLRSLAS" BASE COUNT 591 a 678 c 753 g 497 t ORIGIN 1 gctgttctcc tagcagcgcg ggccggtcgg accgccaagg cagccggcgc tggcgatggg 61 aagcggcgtg gccgccgaca caggcagtgg caaagtttcc cagacgtaca catctggacg 121 cgcggctgcc ggctacccgt gacccctcta ggaagggttc agggattttt aatttggaaa 181 aaaatccacc tggtttcctt tgtcaaggtc tctccgggtg gccagcggca ggagctgcaa 241 acttgggcac ggcggctaca ccggcagcgg accgggcttt ggagaacctc gggactcagg 301 tgctgaggtg cccagcggct ccggacgtgc tacggggtgc gagcgcgggg gagttcgggg 361 cgcacgacaa ggaagggccc ccgggagctc tatatggagg aaggagccca gaatggtgtg 421 caccaggaag accaaaactt tggtgtccac ttgcgtgatc ctgagcggca tgactaacat 481 catctgcctg ctctacgtgg gctgggtcac caactacatc gccagcgtgt atgtgcgggg 541 gcaggagccg gcgcccgaca agaagctgga ggaagacaaa ggggacactc tgaagattat 601 tgagcggctg gaccacctgg agaatgtcat caagcagcac attcaagagg ctcctgccaa 661 gcctgaggag gcagaggccg agcccttcac agactcctct ctgtttgcac actggggcca 721 ggagctcagc cccgaaggcc ggcgcgtggc cctgaagcaa ttccagtact acggctacaa 781 cgcctacctc agcgaccgcc tgcccctggg ccggcccctg cctgacctca gacccagtgg 841 gtgccgtaac ctctcatttc ctgacagcct gccagaggtg agcatcgtgt tcatcttcgt 901 caatgaagcg ctttcagtgc tgctgcgctc catccactcg gccatggaac gcacgccccc 961 acatctgctc aaggagatca ttctggtgga tgacaacagc agtaacgagg aactgaagga 1021 gaagctgacc gaatatgtgg acaaggtgaa cagccagaag ccaggcttca tcaaagtcgt 1081 gcgtcacagc aagcaggaag gcctcatccg ctccagggtc agtggctgga gggcggccac 1141 tgcccctgtg gtggcactct ttgatgccca cgtggagttc aatgtgggct gggctgaacc 1201 tgtactcacc cgcatcaagg agaaccggaa gcggatcatc tcgccatcct ttgataacat 1261 caaatatgac aactttgaga tagaagagta cccgctggct gcccagggct ttgactggga 1321 gctgtggtgc cgctacctaa atccccccaa ggcctggtgg aagctggaga actccacagc 1381 gccaatcagg agccctgccc tcattggctg cttcattgtg gaccggcagt acttccagga 1441 gatcggcctg ctggacgaag gcatggaagt ctacgggggc gagaatgtgg agcttgggat 1501 cagggtgtgg cagtgtggcg ggagtgtgga ggtcctgccc tgctcacgga ttgcccacat 1561 tgagcgagcc cacaagccct acacagagga cctcaccgcc catgtccgca ggaacgctct 1621 cagggtggct gaagtctgga tggatgaatt taaaagccac gtctacatgg catggaacat 1681 accgcaggag gactcaggaa ttgacattgg ggacatcact gcaaggaagg ctctcaggaa 1741 acagctgcag tgcaagacct tccggtggta cctggtcagc gtgtacccag agatgaggat 1801 gtactccgac atcattgcct atggagtgct gcagaattct ctgaagactg atttgtgtct 1861 tgaccagggg ccagatacag agaatgtccc catcatgtac atctgccatg ggatgacgcc 1921 tcagaacgtg tactacacga gcagtcagca gatccatgtg ggcattctga gccccaccgt 1981 ggatgatgat gacaaccgat gcctggtgga cgtcaacagc cggccccggc tcaccgaatg 2041 cagctacgcc aaagccaaga ggatgaagct tcactggcag ttctctcagg gaggacccat 2101 ccagaaccgc aagtctaagc gctgtctgga gctgcaggag aatagcgacc tggagttcgg 2161 cttccagctg gtgttgcaga agtgctcggg ccagcactgg agcatcacca acgtcctgag 2221 gagcctcgcg tcctgaccca ccggggccac ttccggctgc ctctttgcta ctgtgtagca 2281 cctgctgcaa cgttgcctgc tgtccacgtg gggttgtttg gagtctgggg aaccaggtta 2341 gtgggccccc aagaagagct ttttatttcc tattcaattt tcatggagtt tatagaaaga 2401 tgctgattgg taggtgatgg tatgatatca aactattttg cagttgtaaa taggggacag 2461 atggaaaata tttataactg acaataaaat attattaaga aaagaaaaaa aaaaaaaaa //