LOCUS BC058909 4444 bp mRNA linear HUM 13-APR-2006
DEFINITION Homo sapiens CDC42 small effector 2, mRNA (cDNA clone
IMAGE:6528127).
ACCESSION BC058909
VERSION BC058909.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4444)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4444)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: p Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 9910377.
FEATURES Location/Qualifiers
source 1..4444
/db_xref="H-InvDB:HIT000259919"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6528127"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_71"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 1312 a 777 c 907 g 1448 t
ORIGIN
1 gcaggagccg cggagccggc gctgagaggg gctgcggccg gagcgggcgg ctgagacaaa
61 ggcgacgata gggccagatt tgagtgtgtg aatttttgag tgaaacctgg aacccaaatg
121 agaagaaatc tgcaaggaat aactactgac agtgaatctg cggtcatctg tatgcataat
181 atggaatgtt cttaacccag aagtagctga atgtgttact ccattgctga ggagtgacta
241 tctgttatag tccctgggtc aagacaacaa tttttatacc ttcgtcgtgg ttcagaaagg
301 agtctctgta gaaccagaag caaagaaagg aaacaatcca aatttttctt tattaaatcg
361 actgtgtaag atacttgact tccaggaaca aaaacacggt gaaataataa aatttcatct
421 tggcatcact ggacatcatc gtattgagga gcgtattttt ggaacttccc gagttgagat
481 ttggaacctt cattggtgct catttactgt ggactgtaag catgagtgaa ttctggttgt
541 gtttcaactg ctgtattgca gaacagcctc agcctaaaag gcgacggcgg attgacagaa
601 gtatgattgg agagcccaca aactttgtgc atacagctca tgttggatca ggagacctgt
661 tcagtggaat gaattcagtt agctccattc agaaccaaat gcagtccaag ggaggttatg
721 gaggtggaat gcctgccaat gtccagatgc agctcgtgga tacgaaggcg ggatagccct
781 ggtcctttct ccagtgagta ctcagagctg gggtctggac ctgacggcca gacatggcca
841 ggccaataat agtaaatata tgtatatata tataattttt taatggtgaa cttattggga
901 aaggcaaaat tactcagcta agtgtagttt ctgcacttgg aatgtaagtt ttaggttctt
961 ttccttatta agaactttaa atactttaaa acatctggtt ggggaggatt ctgatgacaa
1021 gatgcttctt atgtgtcctt taaacaagag tgaaatcatt attttgagta ttgaggccga
1081 gcatggtggc tcacacctgt aatcccagca ctttgggagg cctaggtggg ctgatcacct
1141 gaggccagga attggagact agcctggcca acatggtgaa accccatctc tactaaaaat
1201 acaaaaatta gctgggcatg gtggcgcatg cctgtaatcg cagctactca ggaggctgag
1261 gcacgagaat tgcttgaacc tgggaggcag gggttgcagt cagctgagaa tgcgccactg
1321 cgctccagcc tgggtgacag agcaagaccc tgtctcaaaa aaagtactga tactaaagat
1381 aatctcttgg gtagtaattt tacagttaag acttcattgt ttataaactt ttcaaattaa
1441 ttaaaaagac tactttgaaa aaggataaac cctgaaaatg tagaaataat ttcaagtttt
1501 tttttgtttt atagggttat tgtgaatttc tatattttct ctgtccacta ttctgtaatt
1561 tttttttgtc ctgtgattgc ttttattttg aattacaaaa aagaagtgtg atggcacctt
1621 gtccaccctg tcgtgattat tccagtgaga tgttactgtt ctgctctgaa gaagatactg
1681 tcagacgaat cctgcatttc cttcagctgg catgcatgcc tttggactca tggacagagt
1741 tctttggatt gtcactgaat tttcaatgtt taatcagtat ggatctgatc ttcgcatgat
1801 cttttttgtg aatgctaaca ccattttgca gttttttttt tctattttaa acatttttct
1861 tttcactgcc gaccccctgc cttacgattt tattggaaag caaggacctg ctattatttg
1921 ttaatttgcc atcatttatg tatattttgg aaggtatgag acccacaagc acaatgatca
1981 tttttatttg tttgtttgtt tgaaacttca gcagaataga tatctgcatg ctttatgaag
2041 ttgttgcttc ggtaagagcc catgggatgc cagaaattaa catttctttg ctgccatggg
2101 ctgatgatgc tgctattaga taaagtttag ctgtggcacc aagtcacatc attttcatag
2161 aaaaagatta cttgtagctt attttagaag tatgaccttt tggtctgttt gattgattga
2221 ttagaattgc aataaaagaa aagcttgcat tcataaggca ttcattctgt tgtaaatgtt
2281 caatatattt attttgagag caaggacctg tggttgtaaa caggtgtggt tacaggtgtg
2341 gttatgtatc tgagtgttgc ggtcatactc tcctccagtc caatcctgag catcttcatc
2401 ttattaatta gctgttcgtt tctttgtgca ctcattcttt tatttttact tctttttaat
2461 gttatggtat ccagttgttt ccagtagcag tttcttgaac ttctggcctg tactactaac
2521 tgcagacctc cagagtcact ggcctttctg tgctctacat attattttag gggccacatc
2581 agttgccaag agcaacatac ataccgacct ggctgaatta ttgccagtga aaacaacctg
2641 tacgaagcct ttgctcaggt tctaaaatat gtttgtcctt gcacgaattt tgtatatttc
2701 aaatatttct gtaaaggttt cttcttttct gttagagtgt ggtgttaagc cagagtcagt
2761 ggtttgtgtt ctcattaaaa tgtttgttta aatcctatgt ccaattcaag cctatctaac
2821 tacatttggt aggattaaca tttcatataa caaatggggc ttaattaaaa actttaactt
2881 ggaataaagg aacagggatc actttatctt ctgccttcat ttaccttagt ccaagattct
2941 tgtaaaacag gcaactgaac aaacattagg tttatgtagg taaaatgtga aagcatttct
3001 cctccacttt ttaaaattta atttacccag tacagcgggg caccagatta cttgatcttt
3061 gtattttgca gttttgagcc tttgtgtcaa tcccaagcac agagaggatc tgccaaggaa
3121 aaacatttgc atcttcggag tagacatttt gcagtttgtt taataacaac ttctaaagta
3181 agttgaattc atccattgtc actgattcac caagtggatg ttgcattgtg gaatttgcct
3241 gagtactgtt gtcattctgc tcagccaggc acggtcagtt tcttggccag ggacattgct
3301 atgtgctgtg tgcaagctct ttagaagaga gattggattt tcttggcatt atcagcactc
3361 atgctattta gtctacttct attttgactg actctttaaa ttagtacaat ttttctactt
3421 gtcatataac tcctggaaca atagtacggg aagccgtgat ccttttccct gactcatgat
3481 tttagtcttt ttccaaatcg ctgttttttt ttgttttttt ttttttgctg ctccaacgac
3541 cagcatgtgt tggagcagat ctccatggta agccaaaagt ggacttgtca gcctataact
3601 actctgcagc tgccactaac tctacaggca cagtaactac actttataca ggagcacatg
3661 ccaaagtgcc tgggaggtgc caataaaatc aagaaataag aaaactacaa aaaaagatac
3721 ggtattaacc ttggacataa ttttttttta gggaggcagc tttcccactt ttataaaggg
3781 ggttgtaaat ctcaagaggt catttgttcc ccatagcagc atatctcatt tttaaattga
3841 agcgaattaa ataggatttt actactcaac attcattata ctgttaatct ttgctgaaat
3901 atatgctaac aaatgttaag caagggaaac tgaagactta gtcatgtgga ttgttagcag
3961 tgatctgcat tctgtaaaag aggtactttc ccatgatgta ggcatgaagt ggtgccagta
4021 agcgtagagc ggaaatgttg actttagtta acattgggtt tagcatttcc agtgcagcat
4081 tatcagtggg cctttaaaaa tacttcgtaa gtacattagc tttcactttg ttgttaaatt
4141 atagcagact cattatagag aacaagtttg ccttgatttt gtttaaaatg acttctgcta
4201 agcacccaga agataaaatt gacatatttt tataaaataa gcatactttt tttgtacatt
4261 gtgttcattc ttgaataaaa tgagttctgt gttggcttgt agatactaaa aagaaagtat
4321 tgattttgat tcaataaatg ttttctttca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4381 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
4441 aaaa
//