LOCUS BC056912 3274 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens polymerase (DNA-directed), delta interacting protein
3, mRNA (cDNA clone MGC:65170 IMAGE:4941153), complete cds.
ACCESSION BC056912
VERSION BC056912.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3274)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3274)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 119 Row: c Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30089918.
FEATURES Location/Qualifiers
source 1..3274
/db_xref="H-InvDB:HIT000259637"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:65170 IMAGE:4941153"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3274
/gene="POLDIP3"
/gene_synonym="KIAA1649"
/gene_synonym="PDIP46"
/gene_synonym="SKAR"
/db_xref="GeneID:84271"
/db_xref="HGNC:HGNC:23782"
CDS 12..1190
/gene="POLDIP3"
/gene_synonym="KIAA1649"
/gene_synonym="PDIP46"
/gene_synonym="SKAR"
/codon_start=1
/product="polymerase (DNA-directed), delta interacting
protein 3"
/protein_id="AAH56912.2"
/db_xref="GeneID:84271"
/db_xref="HGNC:HGNC:23782"
/translation="MADISLDELIRKRGAAAKGRLNARPGVGGVRSRVGIQQGLLSQS
TRTATFQQRFDARQKIGLSDARLKLGVKDAREKLLQKDARFRIKGKVQDAREMLNSRK
QQTTVPQKPRQVADAREKISLKRSSPAAFINPPIGTVTPALKLTKTIQNLYDLDEDDD
GIASVPTKQMKFAASGGFLHHMAGLSSSKLSMSKALPLTKVVQNDAYTAPALPSSIRT
KALTNMSRTLVNKEEPPKELPAAEPVLSPLEGTKMTVNNLHPRVTEEDIVELFCVCGA
LKRARLVHPGVAEVVFVKKDDAITAYKKYNNRCLDGQPMKCNLHMNGNVITSDQPILL
RLSDSPSMKKESELPRRVNSASSSNPPAEVDPDTILKALFKSSGASVTTQPTEFKIKL
"
BASE COUNT 717 a 860 c 915 g 782 t
ORIGIN
1 ggcggagcaa gatggcggac atctccctgg acgaactcat caggaagcgc ggggcggcgg
61 cgaaaggacg gcttaatgcc agaccgggag ttggaggtgt ccgatctcga gttgggatcc
121 agcaaggcct tctcagccag tcaacacgca cagccacctt ccagcagaga tttgatgccc
181 ggcagaagat tggcctctca gatgcccggc tcaaactggg agtcaaggat gcccgggaga
241 agcttttgca gaaagatgcc cgatttcgaa tcaaagggaa agtgcaggat gccagagaga
301 tgttgaactc tcgcaagcag cagaccacgg tgccccagaa gccccgccag gttgctgatg
361 cccgggagaa gatcagcttg aagaggagtt cccctgctgc cttcataaac ccacccattg
421 ggacagtgac ccctgctctg aagctcacca aaaccatcca gaatttatat gacctggatg
481 aagatgatga tggtatagct tccgttccta ctaaacagat gaagtttgca gcctcaggcg
541 gctttctcca ccacatggct gggctaagca gttccaagct ttccatgtcc aaggccctcc
601 ctctcaccaa agtggttcag aatgatgcat acacagctcc tgctctccct tcctctattc
661 gaacaaaagc cttgaccaac atgtcccgga cactggtgaa caaggaagaa ccccccaaag
721 agctgccagc tgctgagcct gttctcagcc cattggaagg caccaagatg actgtgaata
781 atctgcaccc tcgagtcact gaggaggaca ttgttgagct tttctgtgtg tgtggggccc
841 tcaagcgagc tcgactggtc catcctgggg tagcggaggt ggtgtttgtg aaaaaggacg
901 atgccatcac cgcatataag aagtacaaca accggtgtct ggacgggcag ccgatgaagt
961 gcaaccttca catgaatggg aatgttatca cctcagacca gcccatcctg ctgcggctga
1021 gtgacagccc atcaatgaaa aaggagagcg agctgcctcg cagggtgaac tctgcctcct
1081 cctccaaccc ccctgccgaa gtggaccctg acaccatcct gaaggcactc ttcaagtcct
1141 caggggcctc tgtgaccacg cagcccacag aattcaaaat caagctttga gcaggggagt
1201 gaggcagcca gaagtggggg cagaggaggg tggctctgtt tccccaaggc aaagcttatg
1261 accaatgggc catcggactg gagacccctg attgtgggaa gggttgccag ggataaagag
1321 cttcctcact ggatgggacc cgcctttctg tgttgtgttc tgccctgtgc tcttctctct
1381 acgttaacgt ttcctgtagt atgtttcttc atctcatcgc caaggtaggc ttgtgttttt
1441 cagtgtgtgc ctccccgagc ctcagcccca agctgatttc ttatctggaa atggtacact
1501 gaattctctg ggtggctttc ttgtggcccc atgggatgca gcgtgggggc tgtctgaagg
1561 accctgcttt ttccaggggc cgaggggctg cctttccttt gtgtgtatta agcttttcaa
1621 acaatggagg ggatggagag ccctggtgtc ctgacgggag ccaggtcggc ctgagagctg
1681 tgccgctcct ctgtcttgtc agtggaggtg cctgggtggg gagcaggtct caggcctctt
1741 gtcctctccc cagtggctcc aggcctcact agtggcaagg gcaggatgag gctgcaccgc
1801 tgggaagagt ctatctaagc tcttggcttg gagtcccgtg tcgtctccac ccagaggaag
1861 ttctccagag ttcacctttc ccttttcctt gagttgtgct gaatgcccca ccccagctct
1921 ctttcccttc tgggtgtctt tgctgggagg gggctgtgtt gtgagccctc ccggttctca
1981 cctcgcctgg cacttaacca caccctggtt ttgtgtagcc gccagctctc ttctggttgg
2041 gcctttgaaa ggctcagcct cccattgtgc agtgcttggg tttggagctt atttgaatgg
2101 aagaggtcag tttgttcctg gctctccatt tctggcctca gttgtctaca ggacagtggt
2161 cagggatgcc tggaggcata tatccagctg ccaccaaggg gcactgtttg ttcccactta
2221 tgtgagtgac cccatccatc catgaccaga ggattatttt cctgccttgg cagaggagga
2281 ggagtcaagg gagcagggca gctctaccag gcaaggtgtt tccccagcat aggcgcagac
2341 agttgggatg aaacttcaga gcccaggcag tccctgaatg accaggccag tgttgtcact
2401 gagtggtccc ctgctggttg ggagtgaaga gaatccaggc tggcagagct ggagccagtt
2461 ggggagcacg gttctgggag ctctgcaaaa tcagtagcaa gtgctggaaa aggcacatgc
2521 cgaagatact caagagctcc caagatttgc ttgaggctag cccagtgaaa aaaaccagag
2581 actcatgttt ccaggggtca gtctgtcagg caggaaggac ccaggatttg aacccagctt
2641 cagtgtgcag gctctgaggc tgcccaggac gggaaagtcc aaggaagggg cctggtggtg
2701 ctccacttgc agttctttaa agaatgctgc tttttattct cctaaccctt tcaagtgggt
2761 gcagacttct cgttagcagc tggaagacat tcctcccaca cttttccctt cctggcccaa
2821 gagagcatcc agaaggcagt aggacctggt ttttcaggta ctgggagccg ggggctcact
2881 gcttgcactg tgcttagggt agggatggta aatatcctcc ctgcatggct ttatcctccc
2941 tctcatccca aagcaggtat cttctggttg tcacagagtt tcattgagtc cagctgcagc
3001 cacgtggcca tctggagctg gtgctatagg tgaccatctg gtacattgag gggacctgtt
3061 tgcctcctcc actctataag cagtcatctt gggagaccgg gaggagaagg tggtgggcta
3121 gtcctgtgtc ctcctccact tcccatgcct ctatgttacc catctgtgtc tcctgtgcag
3181 aaggagagga aggggcatta agagatgaag ggtgattatg tattacttat ccatttctga
3241 ataaacattt gttattccta aaaaaaaaaa aaaa
//